cassava27189.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava27189.m1 T284140_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.773 0.892
ATMYB121
M07091_2.00 		Arabidopsis thaliana
NYNWACCTAMYHHH
DDDRKTAGGTWNRN		 Dap-seq
OMalley et al.(2016)
MYB121_col_a 		0.680 0.667
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava27189.m1 Myb 28 75
cassava27189.m1 Myb 81 126

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.1276s0050 Salix purpurea SapurV1A.1276s0050 I 0.822
cassava25868.m1 Manihot esculenta cassava25868.m1 I 0.817
Gorai.007G350500 Gossypium raimondii Gorai.007G350500 I 0.810
PRUPE_ppa006730mg Prunus persica PRUPE_ppa006730mg I 0.810
POPTR_0019s05210 Populus trichocarpa POPTR_0019s05210 I 0.808
POPTR_0019s05190 Populus trichocarpa POPTR_0019s05190 I 0.808
POPTR_0019s05200 Populus trichocarpa POPTR_0019s05200 I 0.808
Ciclev10015648m.g Citrus clementina Ciclev10015648m.g I 0.806
cassava6348.valid.m1 Manihot esculenta cassava6348.valid.m1 I 0.806
MDP0000655330 Malus domestica MDP0000655330 I 0.806
cassava9274.m1 Manihot esculenta cassava9274.m1 I 0.806
orange1.1g040726m.g Citrus sinensis orange1.1g040726m.g I 0.806
MDP0000723614 Malus domestica MDP0000723614 I 0.806
Solyc01g005660.1 Solanum lycopersicum Solyc01g005660.1 I 0.803
SapurV1A.1276s0060 Salix purpurea SapurV1A.1276s0060 I 0.798
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.798
SapurV1A.0553s0100 Salix purpurea SapurV1A.0553s0100 I 0.797
evm.TU.supercontig_119.55 Carica papaya evm.TU.supercontig_119.55 I 0.797
SapurV1A.0553s0110 Salix purpurea SapurV1A.0553s0110 I 0.797
SapurV1A.0081s0400 Salix purpurea SapurV1A.0081s0400 I 0.797
POPTR_0003s21120 Populus trichocarpa POPTR_0003s21120 I 0.797
MDP0000791870 Malus domestica MDP0000791870 I 0.797
TCM_025910 Theobroma cacao TCM_025910 I 0.792
Eucgr.K01504 Eucalyptus grandis Eucgr.K01504 I 0.787
VIT_08s0007g07230 Vitis vinifera VIT_08s0007g07230 I 0.787
POPTR_0013s05300 Populus trichocarpa POPTR_0013s05300 I 0.783
GLYMA14G24500 Glycine max GLYMA14G24500 I 0.782
GLYMA13G09980 Glycine max GLYMA13G09980 I 0.782
SapurV1A.0598s0010 Salix purpurea SapurV1A.0598s0010 I 0.782
POPTR_0001s04240 Populus trichocarpa POPTR_0001s04240 I 0.780
TCM_024180 Theobroma cacao TCM_024180 I 0.776
Eucgr.B03606 Eucalyptus grandis Eucgr.B03606 I 0.776
VIT_06s0004g00570 Vitis vinifera VIT_06s0004g00570 I 0.775
Q2TCH0_PETHY Petunia x hybrida Q2TCH0_PETHY D 0.773
SapurV1A.0918s0130 Salix purpurea SapurV1A.0918s0130 I 0.771
Aquca_009_00493 Aquilegia coerulea Aquca_009_00493 I 0.769
MTR_3g083540 Medicago truncatula MTR_3g083540 I 0.768
Gorai.007G260600 Gossypium raimondii Gorai.007G260600 I 0.768
LjT20L14.140.nd Lotus japonicus LjT20L14.140.nd I 0.759
Eucgr.A02110 Eucalyptus grandis Eucgr.A02110 I 0.757
AMTR_s00068p00097220 Amborella trichopoda AMTR_s00068p00097220 I 0.750
AMTR_s00068p00092800 Amborella trichopoda AMTR_s00068p00092800 I 0.750
evm.TU.supercontig_51.138 Carica papaya evm.TU.supercontig_51.138 I 0.747
PK13689.1 Cannabis sativa PK13689.1 I 0.744
Bra039395 Brassica rapa Bra039395 I 0.741
AMTR_s00068p00099460 Amborella trichopoda AMTR_s00068p00099460 I 0.740
MDP0000196982 Malus domestica MDP0000196982 I 0.739
GSMUA_Achr2G19380_001 Musa acuminata GSMUA_Achr2G19380_001 I 0.738
Bo1g138250 Brassica oleracea Bo1g138250 I 0.738
GRMZM2G395672 Zea mays GRMZM2G395672 I 0.736
Aquca_009_00496 Aquilegia coerulea Aquca_009_00496 I 0.729
Bostr.3640s0147 Boechera stricta Bostr.3640s0147 I 0.727
MYB5 Arabidopsis thaliana AT3G13540 I 0.727
mgf001865m Mimulus guttatus mgf001865m I 0.727
ATMYB5 Arabidopsis lyrata scaffold_301556.1 I 0.727
Bra027423 Brassica rapa Bra027423 I 0.727
Thhalv10022057m.g Eutrema salsugineum Thhalv10022057m.g I 0.727
GSMUA_Achr10G14030_001 Musa acuminata GSMUA_Achr10G14030_001 I 0.725
GSMUA_Achr5G06530_001 Musa acuminata GSMUA_Achr5G06530_001 I 0.724
Gorai.013G114900 Gossypium raimondii Gorai.013G114900 I 0.718
AMTR_s00068p00118480 Amborella trichopoda AMTR_s00068p00118480 I 0.718
Lus10039173.g Linum usitatissimum Lus10039173.g I 0.717
Cagra.0690s0007 Capsella grandiflora Cagra.0690s0007 I 0.716
Carubv10014443m.g Capsella rubella Carubv10014443m.g I 0.716
GSMUA_Achr6G14840_001 Musa acuminata GSMUA_Achr6G14840_001 I 0.714
Si004316m.g Setaria italica Si004316m.g I 0.713
AMTR_s00030p00146410 Amborella trichopoda AMTR_s00030p00146410 I 0.707
GSMUA_Achr7G13700_001 Musa acuminata GSMUA_Achr7G13700_001 I 0.706
orange1.1g040841m.g Citrus sinensis orange1.1g040841m.g I 0.703
Eucgr.D02390 Eucalyptus grandis Eucgr.D02390 I 0.703
Pm018338 Prunus mume Pm018338 I 0.703
Gorai.008G126700 Gossypium raimondii Gorai.008G126700 I 0.703
Ciclev10021571m.g Citrus clementina Ciclev10021571m.g I 0.703
MDP0000915330 Malus domestica MDP0000915330 I 0.703
TCM_005112 Theobroma cacao TCM_005112 I 0.703
gene18691-v1.0-hybrid Fragaria vesca gene18691-v1.0-hybrid I 0.703
PK14784.1 Cannabis sativa PK14784.1 I 0.703
PRUPE_ppa009439mg Prunus persica PRUPE_ppa009439mg I 0.703
PRUPE_ppa021577mg Prunus persica PRUPE_ppa021577mg I 0.701
Pm011657 Prunus mume Pm011657 I 0.701
Bra025410 Brassica rapa Bra025410 I 0.700
Bo7g088650 Brassica oleracea Bo7g088650 I 0.697
Solyc02g089190.1 Solanum lycopersicum Solyc02g089190.1 I 0.697
Eucgr.I02057 Eucalyptus grandis Eucgr.I02057 I 0.697
PGSC0003DMG400001376 Solanum tuberosum PGSC0003DMG400001376 I 0.697
Bo9g009020 Brassica oleracea Bo9g009020 I 0.697
Lus10013762.g Linum usitatissimum Lus10013762.g I 0.696
LjSGA_023691.1 Lotus japonicus LjSGA_023691.1 I 0.695
evm.TU.supercontig_14.220 Carica papaya evm.TU.supercontig_14.220 I 0.694
TCM_018971 Theobroma cacao TCM_018971 I 0.694
Ca_17627 Cicer arietinum Ca_17627 I 0.693
AMTR_s00024p00250970 Amborella trichopoda AMTR_s00024p00250970 I 0.693
Gorai.004G150800 Gossypium raimondii Gorai.004G150800 I 0.693
orange1.1g036215m.g Citrus sinensis orange1.1g036215m.g I 0.693
evm.TU.supercontig_51.139 Carica papaya evm.TU.supercontig_51.139 I 0.692
cassava9891.m1 Manihot esculenta cassava9891.m1 I 0.692
SapurV1A.0323s0160 Salix purpurea SapurV1A.0323s0160 I 0.692
Pm015392 Prunus mume Pm015392 I 0.692
PRUPE_ppa016385mg Prunus persica PRUPE_ppa016385mg I 0.692
POPTR_0004s11720 Populus trichocarpa POPTR_0004s11720 I 0.692
SapurV1A.0059s0160 Salix purpurea SapurV1A.0059s0160 I 0.691
POPTR_0003s14430 Populus trichocarpa POPTR_0003s14430 I 0.691
Ca_01329 Cicer arietinum Ca_01329 I 0.690
chr1.CM0105.50.nd Lotus japonicus chr1.CM0105.50.nd I 0.690
PDK_20s1310471g002 Phoenix dactylifera PDK_20s1310471g002 I 0.690
GLYMA19G44660 Glycine max GLYMA19G44660 I 0.690
Gorai.001G207500 Gossypium raimondii Gorai.001G207500 I 0.689
POPTR_0017s13370 Populus trichocarpa POPTR_0017s13370 I 0.689
OS01G0695900 Oryza sativa OS01G0695900 I 0.688
ORUFI01G30610 Oryza rufipogon ORUFI01G30610 I 0.688
ORGLA01G0227100 Oryza glaberrima ORGLA01G0227100 I 0.688
BGIOSGA004260 Oryza indica BGIOSGA004260 I 0.688
OLONG_002608 Oryza longistaminata OLONG_002608 I 0.688
evm.TU.supercontig_96.57 Carica papaya evm.TU.supercontig_96.57 I 0.686
GSMUA_Achr2G04730_001 Musa acuminata GSMUA_Achr2G04730_001 I 0.686
LPERR01G23630 Leersia perrieri LPERR01G23630 I 0.685
BRADI2G47367 Brachypodium distachyon BRADI2G47367 I 0.684
VIT_16s0050g00070 Vitis vinifera VIT_16s0050g00070 I 0.682
POPTR_0014s09630 Populus trichocarpa POPTR_0014s09630 I 0.681
cassava29820.valid.m1 Manihot esculenta cassava29820.valid.m1 I 0.681
SapurV1A.0013s0160 Salix purpurea SapurV1A.0013s0160 I 0.681
MDP0000286143 Malus domestica MDP0000286143 I 0.680
ATMYB121 Arabidopsis thaliana AT3G30210 D 0.680
Cagra.1138s0003 Capsella grandiflora Cagra.1138s0003 I 0.680
Carubv10018530m.g Capsella rubella Carubv10018530m.g I 0.680
Bostr.0556s0619 Boechera stricta Bostr.0556s0619 I 0.680
ATMYB121 Arabidopsis lyrata fgenesh2_kg.5__710__AT3G30210.1 I 0.680
Thhalv10005370m.g Eutrema salsugineum Thhalv10005370m.g I 0.676
ATMYB121 Vitis vinifera VIT_14s0083g01060 I 0.675
SapurV1A.0553s0090 Salix purpurea SapurV1A.0553s0090 I 0.675
SapurV1A.0003s0900 Salix purpurea SapurV1A.0003s0900 I 0.675
POPTR_0002s17460 Populus trichocarpa POPTR_0002s17460 I 0.675
cassava34176.m1 Manihot esculenta cassava34176.m1 I 0.674
Bra036202 Brassica rapa Bra036202 I 0.674
orange1.1g047854m.g Citrus sinensis orange1.1g047854m.g I 0.673
Ciclev10013466m.g Citrus clementina Ciclev10013466m.g I 0.673
POPTR_0001s11100 Populus trichocarpa POPTR_0001s11100 I 0.673
GSMUA_Achr3G27700_001 Musa acuminata GSMUA_Achr3G27700_001 I 0.673
GSMUA_Achr3G06470_001 Musa acuminata GSMUA_Achr3G06470_001 I 0.673
SapurV1A.0059s0150 Salix purpurea SapurV1A.0059s0150 I 0.673
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.673
MTR_7g117730 Medicago truncatula MTR_7g117730 I 0.673
30068.m002544 Ricinus communis 30068.m002544 I 0.673
POPTR_0003s14420 Populus trichocarpa POPTR_0003s14420 I 0.673
PK23594.1 Cannabis sativa PK23594.1 I 0.673
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.673
Gorai.004G044000 Gossypium raimondii Gorai.004G044000 I 0.672
Cla016762 Citrullus lanatus Cla016762 I 0.672
Cucsa.238540 Cucumis sativus Cucsa.238540 I 0.672
Gorai.004G151000 Gossypium raimondii Gorai.004G151000 I 0.670
Pm015309 Prunus mume Pm015309 I 0.670
mgf006108m Mimulus guttatus mgf006108m I 0.670
VIT_15s0046g00170 Vitis vinifera VIT_15s0046g00170 I 0.670
MDP0000157940 Malus domestica MDP0000157940 I 0.669
Gorai.001G090100 Gossypium raimondii Gorai.001G090100 I 0.668
mgf015598m Mimulus guttatus mgf015598m I 0.667
MDP0000144751 Malus domestica MDP0000144751 I 0.666
Pavir.J31180 Panicum virgatum Pavir.J31180 I 0.665
F775_42516 Aegilops tauschii F775_42516 I 0.665
MDP0000140609 Malus domestica MDP0000140609 I 0.664
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.664
gene25098-v1.0-hybrid Fragaria vesca gene25098-v1.0-hybrid I 0.664
Gorai.003G021100 Gossypium raimondii Gorai.003G021100 I 0.664
MDP0000887107 Malus domestica MDP0000887107 I 0.664
GLYMA16G02570 Glycine max GLYMA16G02570 I 0.664
Sb06g023620 Sorghum bicolor Sb06g023620 I 0.664
GLYMA07G05960 Glycine max GLYMA07G05960 I 0.664
MTR_8g027345 Medicago truncatula MTR_8g027345 I 0.662
SapurV1A.0035s0040 Salix purpurea SapurV1A.0035s0040 I 0.661
GLYMA05G35050 Glycine max GLYMA05G35050 I 0.661
GLYMA08G04670 Glycine max GLYMA08G04670 I 0.661