CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g043383m.g
(
Citrus sinensis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
orange1.1g043383m.g
T288916_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT1G14600
M01268_2.00
Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN
PBM
Lambert et al.(2019)
pTH11557
0.666
0.739
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g043383m
Myb
32
82
RLRWTADLHRSFVHAIERLGGEERATPKMVLQIMGVKDLTISHVKSHLQVS
Links
Other
Myb/SANT
family TFs
Other
Citrus sinensis
TFs
118 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10018145m.g
Citrus clementina
Ciclev10018145m.g
I
0.844
Pavir.Gb01051
Panicum virgatum
Pavir.Gb01051
I
0.751
Si011884m.g
Setaria italica
Si011884m.g
I
0.751
Pavir.J09702
Panicum virgatum
Pavir.J09702
I
0.751
GRMZM2G069525
Zea mays
GRMZM2G069525
I
0.751
MDP0000217637
Malus domestica
MDP0000217637
I
0.750
Cla014669
Citrullus lanatus
Cla014669
I
0.746
Sb06g025600
Sorghum bicolor
Sb06g025600
I
0.745
MDP0000312944
Malus domestica
MDP0000312944
I
0.744
LPERR04G17940
Leersia perrieri
LPERR04G17940
I
0.733
OB04G28940
Oryza brachyantha
OB04G28940
I
0.733
TRIUR3_18158
Triticum urartu
TRIUR3_18158
I
0.729
Pavir.J33581
Panicum virgatum
Pavir.J33581
I
0.728
Si039234m.g
Setaria italica
Si039234m.g
I
0.728
evm.TU.supercontig_2794.2
Carica papaya
evm.TU.supercontig_2794.2
I
0.728
Cucsa.045140
Cucumis sativus
Cucsa.045140
I
0.721
F775_04264
Aegilops tauschii
F775_04264
I
0.721
LjT01P07.20.nd
Lotus japonicus
LjT01P07.20.nd
I
0.721
Cucsa.277160
Cucumis sativus
Cucsa.277160
I
0.720
Cla017202
Citrullus lanatus
Cla017202
I
0.720
Pm010236
Prunus mume
Pm010236
I
0.717
mgf019744m
Mimulus guttatus
mgf019744m
I
0.717
PRUPE_ppa014847mg
Prunus persica
PRUPE_ppa014847mg
I
0.716
OLONG_000346
Oryza longistaminata
OLONG_000346
I
0.712
OGLUM02G28020
Oryza glumaepatula
OGLUM02G28020
I
0.712
ORGLA02G0236600
Oryza glaberrima
ORGLA02G0236600
I
0.712
OPUNC02G25130
Oryza punctata
OPUNC02G25130
I
0.712
OMERI02G26760
Oryza meridionalis
OMERI02G26760
I
0.712
ORUFI02G28930
Oryza rufipogon
ORUFI02G28930
I
0.712
ONIVA02G30300
Oryza nivara
ONIVA02G30300
I
0.712
OB02G34860
Oryza brachyantha
OB02G34860
I
0.712
OBART02G27470
Oryza barthii
OBART02G27470
I
0.712
BGIOSGA008790
Oryza indica
BGIOSGA008790
I
0.712
AMTR_s00037p00221530
Amborella trichopoda
AMTR_s00037p00221530
I
0.709
MLOC_67081
Hordeum vulgare
MLOC_67081
N
0.703
F775_22605
Aegilops tauschii
F775_22605
I
0.703
Pm009670
Prunus mume
Pm009670
I
0.703
Aquca_021_00207
Aquilegia coerulea
Aquca_021_00207
I
0.701
gene19641-v1.0-hybrid
Fragaria vesca
gene19641-v1.0-hybrid
I
0.700
OS04G0566600
Oryza sativa
OS04G0566600
I
0.699
BGIOSGA016936
Oryza indica
BGIOSGA016936
I
0.699
OPUNC04G19690
Oryza punctata
OPUNC04G19690
I
0.699
ORUFI04G23540
Oryza rufipogon
ORUFI04G23540
I
0.699
ORGLA04G0189700
Oryza glaberrima
ORGLA04G0189700
I
0.699
ONIVA04G20480
Oryza nivara
ONIVA04G20480
I
0.699
OGLUM04G21960
Oryza glumaepatula
OGLUM04G21960
I
0.699
OBART04G21930
Oryza barthii
OBART04G21930
I
0.699
OLONG_016687
Oryza longistaminata
OLONG_016687
I
0.699
OMERI04G18450
Oryza meridionalis
OMERI04G18450
I
0.699
POPTR_0005s22750
Populus trichocarpa
POPTR_0005s22750
N
0.698
Thhalv10017090m.g
Eutrema salsugineum
Thhalv10017090m.g
I
0.696
Solyc02g076670.2
Solanum lycopersicum
Solyc02g076670.2
I
0.695
PGSC0003DMG400010194
Solanum tuberosum
PGSC0003DMG400010194
I
0.695
POPTR_0021s00430
Populus trichocarpa
POPTR_0021s00430
I
0.694
LPERR02G22340
Leersia perrieri
LPERR02G22340
I
0.694
PDK_20s1474441g001
Phoenix dactylifera
PDK_20s1474441g001
I
0.691
Ciclev10005466m.g
Citrus clementina
Ciclev10005466m.g
I
0.689
gene00600-v1.0-hybrid
Fragaria vesca
gene00600-v1.0-hybrid
I
0.689
orange1.1g020303m.g
Citrus sinensis
orange1.1g020303m.g
I
0.689
SapurV1A.0015s0960
Salix purpurea
SapurV1A.0015s0960
I
0.689
POPTR_0008s14140
Populus trichocarpa
POPTR_0008s14140
I
0.689
MDP0000214282
Malus domestica
MDP0000214282
I
0.688
MDP0000196504
Malus domestica
MDP0000196504
I
0.688
MDP0000234120
Malus domestica
MDP0000234120
I
0.683
MDP0000321302
Malus domestica
MDP0000321302
I
0.683
PRUPE_ppa015662mg
Prunus persica
PRUPE_ppa015662mg
I
0.682
Ca_00645
Cicer arietinum
Ca_00645
I
0.682
cassava15362.m1
Manihot esculenta
cassava15362.m1
I
0.682
Solyc02g080860.1
Solanum lycopersicum
Solyc02g080860.1
I
0.682
GLYMA15G11576
Glycine max
GLYMA15G11576
I
0.682
Gorai.010G181100
Gossypium raimondii
Gorai.010G181100
I
0.682
GLYMA09G00685
Glycine max
GLYMA09G00685
I
0.682
29842.m003572
Ricinus communis
29842.m003572
I
0.682
Thhalv10008620m.g
Eutrema salsugineum
Thhalv10008620m.g
I
0.681
GRMZM2G090230
Zea mays
GRMZM2G090230
I
0.681
mgf023762m
Mimulus guttatus
mgf023762m
I
0.680
Bra018498
Brassica rapa
Bra018498
I
0.679
VIT_00s1624g00010
Vitis vinifera
VIT_00s1624g00010
I
0.678
PGSC0003DMG400004389
Solanum tuberosum
PGSC0003DMG400004389
I
0.677
Solyc03g006150.2
Solanum lycopersicum
Solyc03g006150.2
I
0.677
MTR_8g086410
Medicago truncatula
MTR_8g086410
I
0.675
MTR_2g023580
Medicago truncatula
MTR_2g023580
I
0.674
VIT_01s0137g00050
Vitis vinifera
VIT_01s0137g00050
I
0.671
TCM_011166
Theobroma cacao
TCM_011166
I
0.671
SapurV1A.0203s0150
Salix purpurea
SapurV1A.0203s0150
I
0.671
evm.TU.supercontig_2.82
Carica papaya
evm.TU.supercontig_2.82
I
0.671
PK23854.1
Cannabis sativa
PK23854.1
I
0.671
Eucgr.B02627
Eucalyptus grandis
Eucgr.B02627
I
0.671
POPTR_0010s10990
Populus trichocarpa
POPTR_0010s10990
I
0.671
Aquca_002_01368
Aquilegia coerulea
Aquca_002_01368
I
0.671
cassava20298.m1
Manihot esculenta
cassava20298.m1
I
0.671
29780.m001368
Ricinus communis
29780.m001368
I
0.671
cassava27240.m1
Manihot esculenta
cassava27240.m1
I
0.671
GSMUA_Achr5G19200_001
Musa acuminata
GSMUA_Achr5G19200_001
I
0.671
Gorai.002G169300
Gossypium raimondii
Gorai.002G169300
I
0.671
GSMUA_Achr2G11010_001
Musa acuminata
GSMUA_Achr2G11010_001
I
0.671
GSMUA_Achr11G01510_001
Musa acuminata
GSMUA_Achr11G01510_001
I
0.671
OLONG_019167
Oryza longistaminata
OLONG_019167
I
0.670
ONIVA02G05430
Oryza nivara
ONIVA02G05430
I
0.670
ORGLA02G0047700
Oryza glaberrima
ORGLA02G0047700
I
0.670
OGLUM10G17290
Oryza glumaepatula
OGLUM10G17290
I
0.670
BGIOSGA007064
Oryza indica
BGIOSGA007064
I
0.670
OS02G0168200
Oryza sativa
OS02G0168200
I
0.670
OPUNC02G04370
Oryza punctata
OPUNC02G04370
I
0.670
ORUFI02G05300
Oryza rufipogon
ORUFI02G05300
I
0.670
MTR_2g016220
Medicago truncatula
MTR_2g016220
I
0.669
Traes_1BL_E2629CBC1
Triticum aestivum
Traes_1BL_E2629CBC1
I
0.668
BRADI1G71910
Brachypodium distachyon
BRADI1G71910
I
0.668
MLOC_56821
Hordeum vulgare
MLOC_56821
I
0.668
Carubv10010057m.g
Capsella rubella
Carubv10010057m.g
I
0.666
Cagra.3501s0036
Capsella grandiflora
Cagra.3501s0036
I
0.666
fgenesh2_kg.1__1592__AT1G14600.1
Arabidopsis lyrata
fgenesh2_kg.1__1592__AT1G14600.1
I
0.666
Bra026202
Brassica rapa
Bra026202
I
0.666
Bo5g019810
Brassica oleracea
Bo5g019810
I
0.666
Bostr.24340s0004
Boechera stricta
Bostr.24340s0004
I
0.666
AT1G14600
Arabidopsis thaliana
AT1G14600
D
0.666
OGLUM02G05030
Oryza glumaepatula
OGLUM02G05030
I
0.664
Lus10001149.g
Linum usitatissimum
Lus10001149.g
I
0.664