Pavir.Da02101 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Da02101 T289092_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q8RUX5_MAIZE
M11060_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MRP1_Q2 		0.669 0.804
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Da02101.1.p Myb 138 184

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J01189 Panicum virgatum Pavir.J01189 I 0.805
Si007889m.g Setaria italica Si007889m.g I 0.772
Pavir.Ga00772 Panicum virgatum Pavir.Ga00772 N 0.722
Si032375m.g Setaria italica Si032375m.g N 0.717
Sb10g006570 Sorghum bicolor Sb10g006570 I 0.715
F775_02244 Aegilops tauschii F775_02244 I 0.685
Sb09g003390 Sorghum bicolor Sb09g003390 I 0.669
Q8RUX5_MAIZE Zea mays Q8RUX5_MAIZE D 0.669
GRMZM2G111306 Zea mays GRMZM2G111306 I 0.669
MLOC_54039 Hordeum vulgare MLOC_54039 I 0.667
Pavir.J00203 Panicum virgatum Pavir.J00203 N 0.666
Sb09g003360 Sorghum bicolor Sb09g003360 N 0.665
OPUNC06G04640 Oryza punctata OPUNC06G04640 I 0.665
Sb09g003350 Sorghum bicolor Sb09g003350 N 0.665