CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr2G05640_001
(
Musa acuminata
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GSMUA_Achr2G05640_001
T293362_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BRN2
M07217_2.00
Arabidopsis thaliana
CKTVHDNNNYAMGYWA
TWRCKTRNNNHDBAMG
Dap-seq
OMalley et al.(2016)
ANAC070_colamp_a
0.933
0.858
BRN2
M07218_2.00
Arabidopsis thaliana
TWDCKTVHDNHDYAMGYWAHH
DDTWRCKTRHDNHDBAMGHWA
Dap-seq
OMalley et al.(2016)
ANAC070_col
0.933
0.858
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr2P05640_001
NAC/NAM
14
137
PPGFRFHPTDEELLLYYLKKKVSLEKFELEVVREVDLNKIEPWDLQGTCDRCNEWYFFSHKDRKYPTGSRTNRATGAGFWKATGRDKCIRNSYKKIGMRKTLVFYRGRAPHGQKSDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Musa acuminata
TFs
89 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.237820
Cucumis sativus
Cucsa.237820
I
0.940
Aquca_014_00032
Aquilegia coerulea
Aquca_014_00032
I
0.940
Cla012576
Citrullus lanatus
Cla012576
I
0.940
AMTR_s00099p00131560
Amborella trichopoda
AMTR_s00099p00131560
I
0.940
GRMZM2G435824
Zea mays
GRMZM2G435824
I
0.939
OBART04G13830
Oryza barthii
OBART04G13830
I
0.939
GRMZM2G099144
Zea mays
GRMZM2G099144
I
0.939
ONIVA04G12040
Oryza nivara
ONIVA04G12040
I
0.939
OLONG_020428
Oryza longistaminata
OLONG_020428
I
0.939
BGIOSGA015018
Oryza indica
BGIOSGA015018
I
0.939
BGIOSGA034998
Oryza indica
BGIOSGA034998
I
0.939
Sb06g017720
Sorghum bicolor
Sb06g017720
I
0.938
OGLUM04G13590
Oryza glumaepatula
OGLUM04G13590
I
0.938
OB04G21050
Oryza brachyantha
OB04G21050
I
0.938
Pavir.Gb01599
Panicum virgatum
Pavir.Gb01599
I
0.938
Si012319m.g
Setaria italica
Si012319m.g
I
0.938
Pavir.J07268
Panicum virgatum
Pavir.J07268
I
0.938
VIT_18s0089g01120
Vitis vinifera
VIT_18s0089g01120
I
0.937
Pm022820
Prunus mume
Pm022820
I
0.937
ORUFI04G15090
Oryza rufipogon
ORUFI04G15090
I
0.937
29382.m000084
Ricinus communis
29382.m000084
I
0.937
Lus10013782.g
Linum usitatissimum
Lus10013782.g
I
0.937
Ciclev10024588m.g
Citrus clementina
Ciclev10024588m.g
I
0.937
PRUPE_ppa026376mg
Prunus persica
PRUPE_ppa026376mg
I
0.937
gene31175-v1.0-hybrid
Fragaria vesca
gene31175-v1.0-hybrid
I
0.937
Lus10039153.g
Linum usitatissimum
Lus10039153.g
I
0.937
Gorai.004G267300
Gossypium raimondii
Gorai.004G267300
I
0.937
MDP0000558493
Malus domestica
MDP0000558493
I
0.937
Thhalv10008226m.g
Eutrema salsugineum
Thhalv10008226m.g
I
0.937
orange1.1g042376m.g
Citrus sinensis
orange1.1g042376m.g
I
0.937
GSMUA_Achr6G28890_001
Musa acuminata
GSMUA_Achr6G28890_001
I
0.937
BRN1
Arabidopsis thaliana
AT1G33280
I
0.936
BRADI5G11247
Brachypodium distachyon
BRADI5G11247
I
0.936
Traes_2BL_209C14A8F
Triticum aestivum
Traes_2BL_209C14A8F
I
0.936
Traes_2DL_70F83D4B9
Triticum aestivum
Traes_2DL_70F83D4B9
I
0.936
F775_23174
Aegilops tauschii
F775_23174
I
0.936
Traes_2AL_F0B17F0EA
Triticum aestivum
Traes_2AL_F0B17F0EA
I
0.936
MLOC_19175
Hordeum vulgare
MLOC_19175
I
0.936
MDP0000257674
Malus domestica
MDP0000257674
I
0.935
Bostr.3359s0042
Boechera stricta
Bostr.3359s0042
I
0.935
ANAC015
Arabidopsis lyrata
fgenesh2_kg.1__3458__AT1G33280.1
I
0.935
Carubv10010920m.g
Capsella rubella
Carubv10010920m.g
I
0.934
Eucgr.F04097
Eucalyptus grandis
Eucgr.F04097
I
0.934
Cagra.6133s0030
Capsella grandiflora
Cagra.6133s0030
I
0.934
BRN2
Arabidopsis thaliana
AT4G10350
D
0.933
Thhalv10029403m.g
Eutrema salsugineum
Thhalv10029403m.g
I
0.933
GLYMA09G36820
Glycine max
GLYMA09G36820
I
0.933
MTR_4g035590
Medicago truncatula
MTR_4g035590
I
0.933
Ca_15792
Cicer arietinum
Ca_15792
I
0.933
ANAC070
Arabidopsis lyrata
Al_scaffold_0006_3164
I
0.933
Bo9g088300
Brassica oleracea
Bo9g088300
I
0.933
Bra037914
Brassica rapa
Bra037914
I
0.933
TCM_036034
Theobroma cacao
TCM_036034
I
0.932
Bostr.25463s0283
Boechera stricta
Bostr.25463s0283
I
0.931
Carubv10003879m.g
Capsella rubella
Carubv10003879m.g
I
0.931
Cagra.12686s0005
Capsella grandiflora
Cagra.12686s0005
I
0.931
TRIUR3_28259
Triticum urartu
TRIUR3_28259
I
0.931
Bra000709
Brassica rapa
Bra000709
I
0.929
GLYMA12G00540
Glycine max
GLYMA12G00540
I
0.924
Solyc06g063430.1
Solanum lycopersicum
Solyc06g063430.1
I
0.919
mgf017656m
Mimulus guttatus
mgf017656m
I
0.914
POPTR_0013s09280
Populus trichocarpa
POPTR_0013s09280
I
0.913
cassava4621.m1
Manihot esculenta
cassava4621.m1
I
0.912
SapurV1A.1219s0030
Salix purpurea
SapurV1A.1219s0030
I
0.911
TCM_033728
Theobroma cacao
TCM_033728
I
0.887
Gorai.004G268500
Gossypium raimondii
Gorai.004G268500
I
0.886
Gorai.007G048000
Gossypium raimondii
Gorai.007G048000
I
0.884
GLYMA08G17140
Glycine max
GLYMA08G17140
I
0.882
MTR_2g062730
Medicago truncatula
MTR_2g062730
I
0.882
cassava32687.m1
Manihot esculenta
cassava32687.m1
I
0.882
SMB
Vitis vinifera
VIT_19s0085g01210
I
0.882
LjSGA_059487.1
Lotus japonicus
LjSGA_059487.1
I
0.882
PK10271.1
Cannabis sativa
PK10271.1
I
0.882
29725.m000235
Ricinus communis
29725.m000235
I
0.881
Pm010886
Prunus mume
Pm010886
I
0.881
Solyc12g017400.1
Solanum lycopersicum
Solyc12g017400.1
I
0.881
GRMZM2G155816
Zea mays
GRMZM2G155816
I
0.881
PRUPE_ppa025341mg
Prunus persica
PRUPE_ppa025341mg
I
0.881
gene19898-v1.0-hybrid
Fragaria vesca
gene19898-v1.0-hybrid
I
0.881
Ca_13929
Cicer arietinum
Ca_13929
I
0.881
PGSC0003DMG400009665
Solanum tuberosum
PGSC0003DMG400009665
I
0.881
Cla005561
Citrullus lanatus
Cla005561
I
0.880
GLYMA15G42050
Glycine max
GLYMA15G42050
I
0.876
Si017641m.g
Setaria italica
Si017641m.g
I
0.872
Bra003602
Brassica rapa
Bra003602
I
0.872
Pavir.Aa02770
Panicum virgatum
Pavir.Aa02770
I
0.872
Pavir.Ab01037
Panicum virgatum
Pavir.Ab01037
I
0.872
MDP0000652584
Malus domestica
MDP0000652584
I
0.871
MDP0000501518
Malus domestica
MDP0000501518
I
0.871