CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OBART04G25950
(
Oryza barthii
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
OBART04G25950
T294000_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART04G25950.1
NAC/NAM
12
166
PPGFRFHPRDEELVVDYLYHKLSGGAGEFFGGVAMVDVDLNKCEPWELPAYLLHNLIIFPARARARAAGRRRRADAARVGATEWYFFSLHDRKYATGQRTNRATRSGYWKATGKDRIVHEGTGGEVVGMRKTLVFYQGRAPRGSKTEWVMHEFRV
Links
Other
NAC/NAM
family TFs
Other
Oryza barthii
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA04G0226100
Oryza glaberrima
ORGLA04G0226100
N
0.993
OMERI04G21180
Oryza meridionalis
OMERI04G21180
N
0.990
Traes_2AL_CA89051FD
Triticum aestivum
Traes_2AL_CA89051FD
N
0.975
TRIUR3_34020
Triticum urartu
TRIUR3_34020
N
0.975
Pavir.Gb00488
Panicum virgatum
Pavir.Gb00488
N
0.961
Pavir.Ga00022
Panicum virgatum
Pavir.Ga00022
I
0.961
BGIOSGA014342
Oryza indica
BGIOSGA014342
N
0.955
ORUFI04G27160
Oryza rufipogon
ORUFI04G27160
N
0.955
Si010680m.g
Setaria italica
Si010680m.g
I
0.953
Pavir.Db00380
Panicum virgatum
Pavir.Db00380
N
0.935
Si006975m.g
Setaria italica
Si006975m.g
N
0.930
ONIVA04G24570
Oryza nivara
ONIVA04G24570
N
0.930
F775_26920
Aegilops tauschii
F775_26920
N
0.930
OGLUM04G25460
Oryza glumaepatula
OGLUM04G25460
N
0.929
Traes_7AL_BE3253C8F
Triticum aestivum
Traes_7AL_BE3253C8F
N
0.928
TRIUR3_03895
Triticum urartu
TRIUR3_03895
N
0.928
MLOC_53744
Hordeum vulgare
MLOC_53744
N
0.928
LPERR06G20430
Leersia perrieri
LPERR06G20430
N
0.927
OLONG_010248
Oryza longistaminata
OLONG_010248
N
0.922
F775_30297
Aegilops tauschii
F775_30297
I
0.918
TRIUR3_29250
Triticum urartu
TRIUR3_29250
I
0.918
OB04G32440
Oryza brachyantha
OB04G32440
N
0.918
Traes_7DL_BDD45DB24
Triticum aestivum
Traes_7DL_BDD45DB24
I
0.918
MLOC_25708
Hordeum vulgare
MLOC_25708
N
0.913
Sb07g005610
Sorghum bicolor
Sb07g005610
I
0.899
OPUNC04G23070
Oryza punctata
OPUNC04G23070
N
0.895
GRMZM2G167018
Zea mays
GRMZM2G167018
I
0.893
GRMZM2G063522
Zea mays
GRMZM2G063522
I
0.892
LPERR04G11740
Leersia perrieri
LPERR04G11740
I
0.888
PGSC0003DMG400029593
Solanum tuberosum
PGSC0003DMG400029593
I
0.887
Solyc08g074300.2
Solanum lycopersicum
Solyc08g074300.2
I
0.885
BRADI1G32660
Brachypodium distachyon
BRADI1G32660
I
0.882
GRMZM2G009892
Zea mays
GRMZM2G009892
I
0.880
MTR_1g008740
Medicago truncatula
MTR_1g008740
I
0.880
Pavir.J36955
Panicum virgatum
Pavir.J36955
I
0.876
BGIOSGA014332
Oryza indica
BGIOSGA014332
N
0.871