CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si010053m.g
(
Setaria italica
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Si010053m.g
T295700_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si010053m
NAC/NAM
82
229
PVGFRFKPTLQELVEFYLLPKLLDNPTVPNDAVIEADAYECDPEILTKRYEARGADENWYFLSPRSRRYPGGDRPTRRTADNRGRWKPSTGQSKPGKDAAAGHSKAKKVLKKNLSVGAYEFTENTLAYYVGDPRNETKTKWLMHELTV
Links
Other
NAC/NAM
family TFs
Other
Setaria italica
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Gb01143
Panicum virgatum
Pavir.Gb01143
N
0.992
Pavir.Gb01092
Panicum virgatum
Pavir.Gb01092
N
0.990
Sb06g024980
Sorghum bicolor
Sb06g024980
N
0.975
Si032881m.g
Setaria italica
Si032881m.g
N
0.930
Pavir.Ba02036
Panicum virgatum
Pavir.Ba02036
N
0.919
Pavir.Bb02323
Panicum virgatum
Pavir.Bb02323
N
0.918
Pavir.Ia03443
Panicum virgatum
Pavir.Ia03443
I
0.915
Sb02g026510
Sorghum bicolor
Sb02g026510
I
0.900
Pavir.Ib01528
Panicum virgatum
Pavir.Ib01528
I
0.892
GSMUA_Achr7G23250_001
Musa acuminata
GSMUA_Achr7G23250_001
I
0.890
SapurV1A.0093s0260
Salix purpurea
SapurV1A.0093s0260
I
0.890
LPERR04G17350
Leersia perrieri
LPERR04G17350
I
0.890
Si036303m.g
Setaria italica
Si036303m.g
I
0.888
Si022714m.g
Setaria italica
Si022714m.g
I
0.886
Sb08g022560
Sorghum bicolor
Sb08g022560
I
0.880
OPUNC04G28220
Oryza punctata
OPUNC04G28220
I
0.880
mgf002183m
Mimulus guttatus
mgf002183m
I
0.880
Pavir.J31204
Panicum virgatum
Pavir.J31204
I
0.879
Pavir.J04049
Panicum virgatum
Pavir.J04049
I
0.875
OPUNC04G19000
Oryza punctata
OPUNC04G19000
N
0.874
SELMODRAFT_71307
Selaginella moellendorffii
SELMODRAFT_71307
I
0.874
SELMODRAFT_86855
Selaginella moellendorffii
SELMODRAFT_86855
I
0.874
VIT_06s0004g00020
Vitis vinifera
VIT_06s0004g00020
I
0.873