Eucgr.J01038 (Eucalyptus grandis)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Eucgr.J01038 T297801_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC078
M02372_2.00 		Arabidopsis thaliana
NNRCAMGHMANN
NNTKDCKTGYNN		 PBM
Weirauch et al.(2014)
pTH7209 		0.877 0.851
NAC078
M07226_2.00 		Arabidopsis thaliana
TTDCTTGNDNNDCAAG
CTTGHNNHNCAAGHAA		 Dap-seq
OMalley et al.(2016)
NAC2_colamp_a 		0.877 0.851
NAC078
M07227_2.00 		Arabidopsis thaliana
DTTWCTTGNNNNRCAAG
CTTGYNNNNCAAGWAAH		 Dap-seq
OMalley et al.(2016)
NAC2_col_v3a 		0.877 0.851
NAC078
M11083_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC078_Q2 		0.877 0.851
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.876 0.754
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.876 0.754
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.J01038.1 NAC/NAM 10 136

Links

Other NAC/NAM family TFs
Other Eucalyptus grandis TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc05g055470.2 Solanum lycopersicum Solyc05g055470.2 I 0.940
PGSC0003DMG402023373 Solanum tuberosum PGSC0003DMG402023373 I 0.937
mgf004743m Mimulus guttatus mgf004743m I 0.927
VIT_13s0019g05240 Vitis vinifera VIT_13s0019g05240 I 0.926
GLYMA10G34130 Glycine max GLYMA10G34130 I 0.925
GLYMA20G33430 Glycine max GLYMA20G33430 I 0.925
Ca_08371 Cicer arietinum Ca_08371 I 0.925
mgf000623m Mimulus guttatus mgf000623m I 0.925
chr5.CM0909.750.nc Lotus japonicus chr5.CM0909.750.nc I 0.924
MTR_1g090720 Medicago truncatula MTR_1g090720 I 0.921
MDP0000437676 Malus domestica MDP0000437676 I 0.918
Cla020838 Citrullus lanatus Cla020838 I 0.915
Pm017547 Prunus mume Pm017547 I 0.914
Cucsa.308760 Cucumis sativus Cucsa.308760 I 0.910
PK06477.1 Cannabis sativa PK06477.1 I 0.909
PGSC0003DMG400031071 Solanum tuberosum PGSC0003DMG400031071 N 0.907
VIT_13s0019g05230 Vitis vinifera VIT_13s0019g05230 I 0.905
Solyc11g008000.1 Solanum lycopersicum Solyc11g008000.1 I 0.901
Lus10023537.g Linum usitatissimum Lus10023537.g I 0.901
Gorai.012G007000 Gossypium raimondii Gorai.012G007000 I 0.900
SapurV1A.0213s0310 Salix purpurea SapurV1A.0213s0310 I 0.897
ANAC050 Arabidopsis thaliana AT3G10480 D 0.897
Gorai.009G309300 Gossypium raimondii Gorai.009G309300 I 0.896
POPTR_0010s23630 Populus trichocarpa POPTR_0010s23630 I 0.893
cassava22912.valid.m1 Manihot esculenta cassava22912.valid.m1 I 0.893
TCM_043357 Theobroma cacao TCM_043357 I 0.892
Lus10037939.g Linum usitatissimum Lus10037939.g I 0.891
Lus10038670.g Linum usitatissimum Lus10038670.g I 0.891
MDP0000258167 Malus domestica MDP0000258167 I 0.883
LPERR08G20450 Leersia perrieri LPERR08G20450 I 0.883
OB08G30590 Oryza brachyantha OB08G30590 I 0.879
NAC078 Arabidopsis thaliana AT5G04410 D 0.877
Bra008980 Brassica rapa Bra008980 I 0.877
Bostr.2128s0007 Boechera stricta Bostr.2128s0007 I 0.877
NAC2 Arabidopsis lyrata scaffold_600382.1 I 0.877
ANAC050 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000864 I 0.876
Bra009456 Brassica rapa Bra009456 I 0.876
Bo9g180050 Brassica oleracea Bo9g180050 I 0.876
Bra028790 Brassica rapa Bra028790 I 0.876
Si013361m.g Setaria italica Si013361m.g I 0.876
ANAC052 Arabidopsis lyrata fgenesh2_kg.3__1083__AT3G10490.2 I 0.876
Bostr.22252s0012 Boechera stricta Bostr.22252s0012 I 0.876
Bostr.22252s0011 Boechera stricta Bostr.22252s0011 I 0.876
Cagra.0834s0029 Capsella grandiflora Cagra.0834s0029 I 0.876
Carubv10013694m.g Capsella rubella Carubv10013694m.g I 0.876
Sb07g023900 Sorghum bicolor Sb07g023900 I 0.875
Pavir.Fb02407 Panicum virgatum Pavir.Fb02407 I 0.873
Pavir.Fa00048 Panicum virgatum Pavir.Fa00048 I 0.873
TRIUR3_33524 Triticum urartu TRIUR3_33524 I 0.873
F775_27564 Aegilops tauschii F775_27564 I 0.873
Traes_7BL_FB5FAC1E8 Triticum aestivum Traes_7BL_FB5FAC1E8 I 0.873
Traes_7DS_9FBF54244 Triticum aestivum Traes_7DS_9FBF54244 I 0.873
SapurV1A.0394s0050 Salix purpurea SapurV1A.0394s0050 I 0.871
Thhalv10013110m.g Eutrema salsugineum Thhalv10013110m.g I 0.871