Gorai.008G261400 (Gossypium raimondii)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Gorai.008G261400 T298133_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NTL9
M02371_2.00 		Arabidopsis thaliana
ATTACTTAA
TTAAGTAAT		 PBM
Weirauch et al.(2014)
pTH8207 		0.916 0.886
NTL9
M11081_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBNAC_01 		0.916 0.886
NTL9
M11082_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBNAC_02 		0.916 0.886
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.008G261400.1 NAC/NAM 10 136
Gorai.008G261400.2 NAC/NAM 10 136
Gorai.008G261400.3 NAC/NAM 10 136
Gorai.008G261400.4 NAC/NAM 10 136
Gorai.008G261400.5 NAC/NAM 10 136

Links

Other NAC/NAM family TFs
Other Gossypium raimondii TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_015584 Theobroma cacao TCM_015584 I 0.967
PK02019.1 Cannabis sativa PK02019.1 I 0.960
Lus10033251.g Linum usitatissimum Lus10033251.g I 0.957
Lus10008285.g Linum usitatissimum Lus10008285.g I 0.957
evm.TU.supercontig_37.112 Carica papaya evm.TU.supercontig_37.112 I 0.956
POPTR_0011s15230 Populus trichocarpa POPTR_0011s15230 I 0.955
30068.m002619 Ricinus communis 30068.m002619 I 0.955
VIT_02s0025g03020 Vitis vinifera VIT_02s0025g03020 I 0.954
POPTR_0001s45700 Populus trichocarpa POPTR_0001s45700 I 0.954
Eucgr.E01095 Eucalyptus grandis Eucgr.E01095 I 0.951
orange1.1g009388m.g Citrus sinensis orange1.1g009388m.g I 0.948
Ciclev10019282m.g Citrus clementina Ciclev10019282m.g I 0.948
NAC014 Arabidopsis thaliana AT1G33060 I 0.947
Pm029581 Prunus mume Pm029581 I 0.947
PRUPE_ppa001291mg Prunus persica PRUPE_ppa001291mg I 0.947
Thhalv10007021m.g Eutrema salsugineum Thhalv10007021m.g I 0.947
Bra010193 Brassica rapa Bra010193 I 0.947
Bo5g086780 Brassica oleracea Bo5g086780 I 0.947
Gorai.003G073300 Gossypium raimondii Gorai.003G073300 I 0.947
Carubv10008529m.g Capsella rubella Carubv10008529m.g I 0.946
Cagra.1443s0001 Capsella grandiflora Cagra.1443s0001 I 0.946
Bostr.3359s0059 Boechera stricta Bostr.3359s0059 I 0.946
ANAC014 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002639 I 0.945
MDP0000266908 Malus domestica MDP0000266908 I 0.943
mgf022344m Mimulus guttatus mgf022344m I 0.942
gene01851-v1.0-hybrid Fragaria vesca gene01851-v1.0-hybrid I 0.937
SapurV1A.0285s0090 Salix purpurea SapurV1A.0285s0090 I 0.935
Lus10010148.g Linum usitatissimum Lus10010148.g I 0.933
MDP0000658409 Malus domestica MDP0000658409 I 0.931
Bostr.7867s1416 Boechera stricta Bostr.7867s1416 I 0.916
NTL9 Arabidopsis thaliana AT4G35580 D 0.916
NTL9 Arabidopsis lyrata fgenesh2_kg.7__521__AT4G35580.1 I 0.916
Cagra.2350s0100 Capsella grandiflora Cagra.2350s0100 I 0.916
Carubv10007613m.g Capsella rubella Carubv10007613m.g I 0.916
Aquca_020_00035 Aquilegia coerulea Aquca_020_00035 I 0.914
SapurV1A.0666s0060 Salix purpurea SapurV1A.0666s0060 N 0.909
Aquca_020_00034 Aquilegia coerulea Aquca_020_00034 I 0.908
VIT_16s0098g00760 Vitis vinifera VIT_16s0098g00760 I 0.886
VIT_18s0001g01820 Vitis vinifera VIT_18s0001g01820 I 0.882
Cucsa.273280 Cucumis sativus Cucsa.273280 N 0.879
Cla002432 Citrullus lanatus Cla002432 N 0.879
gene12442-v1.0-hybrid Fragaria vesca gene12442-v1.0-hybrid N 0.873