CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
scaffold861-EXSNAP2012.4
(
Pristionchus exspectatus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
scaffold861-EXSNAP2012.4
T310336_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold861-EXSNAP2012.4
Nuclear receptor
13
83
RLCLVCTAKSDSAHFGVDSCRACAAFFRRTVSLGKRYICRQGTQNCEVNKDVRYICRRCRYIKCLSIGMHP
Links
Other
Nuclear receptor
family TFs
Other
Pristionchus exspectatus
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold1278-EXSNAP2012.5
Pristionchus exspectatus
scaffold1278-EXSNAP2012.5
N
0.967
scaffold119-EXSNAP2012.21
Pristionchus exspectatus
scaffold119-EXSNAP2012.21
N
0.950
scaffold260-EXSNAP2012.15
Pristionchus exspectatus
scaffold260-EXSNAP2012.15
I
0.860
PPA08785
Pristionchus pacificus
PPA08785
I
0.860
scaffold183-EXSNAP2012.18
Pristionchus exspectatus
scaffold183-EXSNAP2012.18
I
0.860
PPA10478
Pristionchus pacificus
PPA10478
I
0.860
PPA13604
Pristionchus pacificus
PPA13604
N
0.855
PPA26904
Pristionchus pacificus
PPA26904
N
0.831
scaffold542-EXSNAP2012.12
Pristionchus exspectatus
scaffold542-EXSNAP2012.12
N
0.831
scaffold1235-EXSNAP2012.2
Pristionchus exspectatus
scaffold1235-EXSNAP2012.2
I
0.816
PPA29361
Pristionchus pacificus
PPA29361
I
0.816
PPA06756
Pristionchus pacificus
PPA06756
N
0.802
SMUV_0000909301
Syphacia muris
SMUV_0000909301
I
0.788
NECAME_01500
Necator americanus
NECAME_01500
I
0.786
PPA14290
Pristionchus pacificus
PPA14290
I
0.785
CBN03769
Caenorhabditis brenneri
CBN03769
I
0.763