SMUV_0000909301 (Syphacia muris)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SMUV_0000909301 T310429_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.843 0.586
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000909301-mRNA-1 Nuclear receptor 5 75

Links

Other Nuclear receptor family TFs
Other Syphacia muris TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.983
PPA08785 Pristionchus pacificus PPA08785 I 0.905
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.905
PPA10478 Pristionchus pacificus PPA10478 I 0.903
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.903
L596_g24910 Steinernema carpocapsae L596_g24910 N 0.882
L892_g8146 Steinernema scapterisci L892_g8146 N 0.880
PPA29361 Pristionchus pacificus PPA29361 I 0.877
L889_g16048 Steinernema feltiae L889_g16048 N 0.877
CBN03769 Caenorhabditis brenneri CBN03769 I 0.874
NECAME_01500 Necator americanus NECAME_01500 I 0.868
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.868
BXY_0973100 Bursaphelenchus xylophilus BXY_0973100 I 0.857
L898_g9580 Steinernema monticolum L898_g9580 I 0.856
TCNE_0001892601 Toxocara canis TCNE_0001892601 N 0.856
CBN04619 Caenorhabditis brenneri CBN04619 I 0.856
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.849
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.849
ASU_03038 Ascaris suum ASU_03038 N 0.847
L892_g10708 Steinernema scapterisci L892_g10708 I 0.847
GPLIN_000628500 Globodera pallida GPLIN_000628500 N 0.843
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.843
GPLIN_000805100 Globodera pallida GPLIN_000805100 N 0.843
CRE18529 Caenorhabditis remanei CRE18529 I 0.842
L889_g9698 Steinernema feltiae L889_g9698 I 0.840
L889_g987 Steinernema feltiae L889_g987 I 0.840
L893_g3450 Steinernema glaseri L893_g3450 N 0.840
CBG12152 Caenorhabditis briggsae CBG12152 I 0.839
scaffold1278-EXSNAP2012.5 Pristionchus exspectatus scaffold1278-EXSNAP2012.5 N 0.837
ASIM_0000109601 Anisakis simplex ASIM_0000109601 N 0.827
L893_g2090 Steinernema glaseri L893_g2090 I 0.825
scaffold119-EXSNAP2012.21 Pristionchus exspectatus scaffold119-EXSNAP2012.21 N 0.822
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.815
CBG16375 Caenorhabditis briggsae CBG16375 I 0.814
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.810
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.804
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.803
CBG04789 Caenorhabditis briggsae CBG04789 I 0.801
L893_g9517 Steinernema glaseri L893_g9517 I 0.800
L892_g8140 Steinernema scapterisci L892_g8140 I 0.800
ACAC_0000388601 Angiostrongylus cantonensis ACAC_0000388601 N 0.799
L898_g28806 Steinernema monticolum L898_g28806 I 0.796
L889_g10781 Steinernema feltiae L889_g10781 I 0.794
nhr-33 Caenorhabditis elegans WBGene00013976 N 0.794
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.793
CRE27659 Caenorhabditis remanei CRE27659 I 0.793
CJA10576 Caenorhabditis japonica CJA10576 I 0.792
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.792
CBN18264 Caenorhabditis brenneri CBN18264 I 0.789
scaffold861-EXSNAP2012.4 Pristionchus exspectatus scaffold861-EXSNAP2012.4 N 0.788
L892_g8145 Steinernema scapterisci L892_g8145 I 0.787
L893_g4569 Steinernema glaseri L893_g4569 I 0.787
CBN03149 Caenorhabditis brenneri CBN03149 N 0.785
BXY_1598800 Bursaphelenchus xylophilus BXY_1598800 N 0.778
nhr-16 Caenorhabditis elegans WBGene00003615 I 0.777
L892_g15823 Steinernema scapterisci L892_g15823 N 0.770
L889_g21170 Steinernema feltiae L889_g21170 N 0.770
L898_g30838 Steinernema monticolum L898_g30838 N 0.770
L596_g27594 Steinernema carpocapsae L596_g27594 N 0.770
L892_g8144 Steinernema scapterisci L892_g8144 I 0.769
PPA13604 Pristionchus pacificus PPA13604 N 0.768
scaffold28-EXSNAP2012.86 Pristionchus exspectatus scaffold28-EXSNAP2012.86 N 0.768
CRE09011 Caenorhabditis remanei CRE09011 I 0.764
nhr-53 Caenorhabditis elegans WBGene00003643 I 0.750
CRE17354 Caenorhabditis remanei CRE17354 I 0.746