GPLIN_000628500 (Globodera pallida)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 GPLIN_000628500 T308675_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_000628500 Nuclear receptor 27 96

Links

Other Nuclear receptor family TFs
Other Globodera pallida TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GPLIN_000805100 Globodera pallida GPLIN_000805100 N 0.990
BXY_0973100 Bursaphelenchus xylophilus BXY_0973100 I 0.967
L596_g24910 Steinernema carpocapsae L596_g24910 N 0.967
L889_g16048 Steinernema feltiae L889_g16048 N 0.964
L892_g8146 Steinernema scapterisci L892_g8146 N 0.964
L898_g9580 Steinernema monticolum L898_g9580 I 0.957
L893_g3450 Steinernema glaseri L893_g3450 N 0.957
GPLIN_000989800 Globodera pallida GPLIN_000989800 N 0.949
TCNE_0001892601 Toxocara canis TCNE_0001892601 N 0.939
ASU_03038 Ascaris suum ASU_03038 N 0.937
ASIM_0000109601 Anisakis simplex ASIM_0000109601 N 0.908
ACAC_0000388601 Angiostrongylus cantonensis ACAC_0000388601 N 0.902
scaffold28-EXSNAP2012.86 Pristionchus exspectatus scaffold28-EXSNAP2012.86 N 0.882
L892_g8144 Steinernema scapterisci L892_g8144 I 0.850
BXY_1598800 Bursaphelenchus xylophilus BXY_1598800 N 0.846
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.843
L892_g10708 Steinernema scapterisci L892_g10708 I 0.841
CBN03149 Caenorhabditis brenneri CBN03149 N 0.836
L898_g28806 Steinernema monticolum L898_g28806 I 0.835
nhr-33 Caenorhabditis elegans WBGene00013976 N 0.835
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.832
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.832
nhr-53 Caenorhabditis elegans WBGene00003643 I 0.831
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.823
CBG17366 Caenorhabditis briggsae CBG17366 N 0.820
CBN03769 Caenorhabditis brenneri CBN03769 I 0.818
L893_g2090 Steinernema glaseri L893_g2090 I 0.815
CRE09011 Caenorhabditis remanei CRE09011 I 0.813
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.810
L893_g9516 Steinernema glaseri L893_g9516 N 0.807
CBG12152 Caenorhabditis briggsae CBG12152 I 0.802
CRE18529 Caenorhabditis remanei CRE18529 I 0.802
CBG04789 Caenorhabditis briggsae CBG04789 I 0.783
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.778
PPA08785 Pristionchus pacificus PPA08785 I 0.778
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.775
PPA10478 Pristionchus pacificus PPA10478 I 0.775
PPA29361 Pristionchus pacificus PPA29361 I 0.774
L898_g18539 Steinernema monticolum L898_g18539 I 0.771
CBN18264 Caenorhabditis brenneri CBN18264 I 0.771
L889_g10781 Steinernema feltiae L889_g10781 I 0.770
L889_g17146 Steinernema feltiae L889_g17146 I 0.747