CBG12152 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG12152 T301530_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.976 0.829
nhr-70
M00695_2.00 		Caenorhabditis elegans
NYTGTAGYYD
HRRCTACARN		 PBM
Narasimhan et al.(2015)
pTH9174 		0.867 0.657
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG12152 Nuclear receptor 28 97

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE18529 Caenorhabditis remanei CRE18529 I 0.990
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.976
CBN03769 Caenorhabditis brenneri CBN03769 I 0.975
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.975
CBN24070 Caenorhabditis brenneri CBN24070 I 0.972
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.970
CRE17354 Caenorhabditis remanei CRE17354 I 0.967
CJA04414 Caenorhabditis japonica CJA04414 I 0.958
CBN03440 Caenorhabditis brenneri CBN03440 I 0.958
CJA07390 Caenorhabditis japonica CJA07390 I 0.958
CBG03687 Caenorhabditis briggsae CBG03687 I 0.956
CRE17310 Caenorhabditis remanei CRE17310 I 0.952
CRE17355 Caenorhabditis remanei CRE17355 I 0.946
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.945
CRE27659 Caenorhabditis remanei CRE27659 I 0.939
CBG16375 Caenorhabditis briggsae CBG16375 I 0.937
CJA10576 Caenorhabditis japonica CJA10576 I 0.933
CBN04619 Caenorhabditis brenneri CBN04619 I 0.929
nhr-16 Caenorhabditis elegans WBGene00003615 I 0.921
L892_g8140 Steinernema scapterisci L892_g8140 I 0.911
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.910
CBN16902 Caenorhabditis brenneri CBN16902 I 0.907
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.904
L893_g4569 Steinernema glaseri L893_g4569 I 0.901
L892_g8145 Steinernema scapterisci L892_g8145 I 0.900
L893_g9517 Steinernema glaseri L893_g9517 I 0.899
CRE27174 Caenorhabditis remanei CRE27174 I 0.894
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.894
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.892
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.889
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.887
CRE07801 Caenorhabditis remanei CRE07801 I 0.886
L898_g10723 Steinernema monticolum L898_g10723 I 0.885
PPA29361 Pristionchus pacificus PPA29361 I 0.885
L889_g987 Steinernema feltiae L889_g987 I 0.884
L889_g9698 Steinernema feltiae L889_g9698 I 0.884
L892_g10708 Steinernema scapterisci L892_g10708 I 0.882
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.879
L898_g28806 Steinernema monticolum L898_g28806 I 0.877
L892_g8144 Steinernema scapterisci L892_g8144 I 0.876
PPA08785 Pristionchus pacificus PPA08785 I 0.874
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.874
PPA10478 Pristionchus pacificus PPA10478 I 0.873
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.873
nhr-70 Caenorhabditis elegans WBGene00003660 D 0.867
CBG20699 Caenorhabditis briggsae CBG20699 I 0.864
CBG03688 Caenorhabditis briggsae CBG03688 I 0.853
L893_g2090 Steinernema glaseri L893_g2090 I 0.852
NECAME_01500 Necator americanus NECAME_01500 I 0.850
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.839
BXY_0973100 Bursaphelenchus xylophilus BXY_0973100 I 0.839
L889_g10781 Steinernema feltiae L889_g10781 I 0.825
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.817
L889_g17146 Steinernema feltiae L889_g17146 I 0.809
RSKR_0000313900 Rhabditophanes kr3021 RSKR_0000313900 N 0.806
GPLIN_000805100 Globodera pallida GPLIN_000805100 N 0.802
GPLIN_000628500 Globodera pallida GPLIN_000628500 N 0.802
CRE09011 Caenorhabditis remanei CRE09011 I 0.792
nhr-53 Caenorhabditis elegans WBGene00003643 I 0.768
L898_g18539 Steinernema monticolum L898_g18539 I 0.756
L898_g9580 Steinernema monticolum L898_g9580 I 0.751
L892_g8146 Steinernema scapterisci L892_g8146 N 0.748
CBN18264 Caenorhabditis brenneri CBN18264 I 0.747
ACAC_0000388601 Angiostrongylus cantonensis ACAC_0000388601 N 0.747
CBG04789 Caenorhabditis briggsae CBG04789 I 0.747