CBN16902 (Caenorhabditis brenneri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBN16902 T301783_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.899 0.714
nhr-70
M00695_2.00 		Caenorhabditis elegans
NYTGTAGYYD
HRRCTACARN		 PBM
Narasimhan et al.(2015)
pTH9174 		0.831 0.700
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN16902 Nuclear receptor 79 148

Links

Other Nuclear receptor family TFs
Other Caenorhabditis brenneri TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE27174 Caenorhabditis remanei CRE27174 I 0.988
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.986
CJA07390 Caenorhabditis japonica CJA07390 I 0.964
CJA04414 Caenorhabditis japonica CJA04414 I 0.964
CBG16375 Caenorhabditis briggsae CBG16375 I 0.922
L889_g987 Steinernema feltiae L889_g987 I 0.920
CBN03769 Caenorhabditis brenneri CBN03769 I 0.920
L889_g9698 Steinernema feltiae L889_g9698 I 0.920
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.920
CBN04619 Caenorhabditis brenneri CBN04619 I 0.916
CRE18529 Caenorhabditis remanei CRE18529 I 0.912
L892_g8145 Steinernema scapterisci L892_g8145 I 0.909
CBG12152 Caenorhabditis briggsae CBG12152 I 0.907
L893_g4569 Steinernema glaseri L893_g4569 I 0.907
CJA10576 Caenorhabditis japonica CJA10576 I 0.902
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.899
CRE27659 Caenorhabditis remanei CRE27659 I 0.892
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.881
L889_g10781 Steinernema feltiae L889_g10781 I 0.881
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.878
CRE17355 Caenorhabditis remanei CRE17355 I 0.871
CBG03687 Caenorhabditis briggsae CBG03687 I 0.857
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.853
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.838
CBG03688 Caenorhabditis briggsae CBG03688 I 0.836
CRE07801 Caenorhabditis remanei CRE07801 I 0.835
CRE17310 Caenorhabditis remanei CRE17310 I 0.832
nhr-70 Caenorhabditis elegans WBGene00003660 D 0.831
CBN18264 Caenorhabditis brenneri CBN18264 I 0.829
CBG20699 Caenorhabditis briggsae CBG20699 I 0.829
BXY_1188900 Bursaphelenchus xylophilus BXY_1188900 N 0.828
L893_g2090 Steinernema glaseri L893_g2090 I 0.811
CBN24070 Caenorhabditis brenneri CBN24070 I 0.811
CBG04789 Caenorhabditis briggsae CBG04789 I 0.808
CRE09011 Caenorhabditis remanei CRE09011 I 0.807
CBG01395 Caenorhabditis briggsae CBG01395 N 0.793
nhr-53 Caenorhabditis elegans WBGene00003643 I 0.792
ASIM_0000109601 Anisakis simplex ASIM_0000109601 N 0.791
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.791
PPA08785 Pristionchus pacificus PPA08785 I 0.791
PPA10478 Pristionchus pacificus PPA10478 I 0.790
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.790
L892_g8140 Steinernema scapterisci L892_g8140 I 0.785
CRE17354 Caenorhabditis remanei CRE17354 I 0.784
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.780
BXY_1598800 Bursaphelenchus xylophilus BXY_1598800 N 0.775
PPA29361 Pristionchus pacificus PPA29361 I 0.772
NECAME_01500 Necator americanus NECAME_01500 I 0.768
TCNE_0001892601 Toxocara canis TCNE_0001892601 N 0.766
L893_g9517 Steinernema glaseri L893_g9517 I 0.763
L892_g8144 Steinernema scapterisci L892_g8144 I 0.763
L898_g28806 Steinernema monticolum L898_g28806 I 0.762
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.761
CBN03440 Caenorhabditis brenneri CBN03440 I 0.752
BXY_1188800 Bursaphelenchus xylophilus BXY_1188800 N 0.747