L893_g2090 (Steinernema glaseri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L893_g2090 T309343_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.864 0.557
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L893_g2090.t1 Nuclear receptor 2 71
L893_g2090.t2 Nuclear receptor 2 71

Links

Other Nuclear receptor family TFs
Other Steinernema glaseri TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L898_g28806 Steinernema monticolum L898_g28806 I 0.982
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.981
L892_g8144 Steinernema scapterisci L892_g8144 I 0.978
L889_g10781 Steinernema feltiae L889_g10781 I 0.972
CBN04619 Caenorhabditis brenneri CBN04619 I 0.918
L889_g9698 Steinernema feltiae L889_g9698 I 0.898
L889_g987 Steinernema feltiae L889_g987 I 0.898
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.896
CBN03769 Caenorhabditis brenneri CBN03769 I 0.894
BXY_1188800 Bursaphelenchus xylophilus BXY_1188800 N 0.874
CBG16375 Caenorhabditis briggsae CBG16375 I 0.869
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.867
L892_g8140 Steinernema scapterisci L892_g8140 I 0.866
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.866
CJA10576 Caenorhabditis japonica CJA10576 I 0.864
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.864
L892_g8145 Steinernema scapterisci L892_g8145 I 0.861
L893_g4569 Steinernema glaseri L893_g4569 I 0.861
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.860
CRE18529 Caenorhabditis remanei CRE18529 I 0.859
CRE27659 Caenorhabditis remanei CRE27659 I 0.854
CBG12152 Caenorhabditis briggsae CBG12152 I 0.852
L893_g9517 Steinernema glaseri L893_g9517 I 0.849
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.844
PPA08785 Pristionchus pacificus PPA08785 I 0.842
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.842
PPA10478 Pristionchus pacificus PPA10478 I 0.839
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.839
L898_g18539 Steinernema monticolum L898_g18539 I 0.833
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.825
BXY_0973100 Bursaphelenchus xylophilus BXY_0973100 I 0.818
GPLIN_000628500 Globodera pallida GPLIN_000628500 N 0.815
GPLIN_000805100 Globodera pallida GPLIN_000805100 N 0.815
CJA04414 Caenorhabditis japonica CJA04414 I 0.814
CJA07390 Caenorhabditis japonica CJA07390 I 0.814
CBG04789 Caenorhabditis briggsae CBG04789 I 0.812
CBN16902 Caenorhabditis brenneri CBN16902 I 0.811
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.810
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.804
L898_g10723 Steinernema monticolum L898_g10723 I 0.804
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.802
CBN18264 Caenorhabditis brenneri CBN18264 I 0.801
L898_g9580 Steinernema monticolum L898_g9580 I 0.800
L893_g3450 Steinernema glaseri L893_g3450 N 0.799
CBG03687 Caenorhabditis briggsae CBG03687 I 0.798
L892_g10708 Steinernema scapterisci L892_g10708 I 0.798
nhr-53 Caenorhabditis elegans WBGene00003643 I 0.797
L892_g8146 Steinernema scapterisci L892_g8146 N 0.792
CRE27174 Caenorhabditis remanei CRE27174 I 0.790
BXY_1188900 Bursaphelenchus xylophilus BXY_1188900 N 0.789
ASIM_0000109601 Anisakis simplex ASIM_0000109601 N 0.789
L889_g16048 Steinernema feltiae L889_g16048 N 0.787
L596_g24910 Steinernema carpocapsae L596_g24910 N 0.786
ACAC_0000388601 Angiostrongylus cantonensis ACAC_0000388601 N 0.785
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.783
CRE17310 Caenorhabditis remanei CRE17310 I 0.779
CRE09011 Caenorhabditis remanei CRE09011 I 0.777
CBG17366 Caenorhabditis briggsae CBG17366 N 0.766
NECAME_01500 Necator americanus NECAME_01500 I 0.759
ASU_03038 Ascaris suum ASU_03038 N 0.752