CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BXY_0973100
(
Bursaphelenchus xylophilus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
BXY_0973100
T308319_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-86
M02415_2.00
Caenorhabditis elegans
KTGTAGTC
GACTACAM
PBM
Weirauch et al.(2014)
pTH8598
0.820
0.586
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BXY_0973100.1
Nuclear receptor
110
179
HFCVVCGDESDGLHFGQYTCRACAAFFRRTVSLRLEYTCKHNNMCEIEKNARNMCRSCRFQKCLNKGMQT
Links
Other
Nuclear receptor
family TFs
Other
Bursaphelenchus xylophilus
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L893_g3450
Steinernema glaseri
L893_g3450
N
0.980
L898_g9580
Steinernema monticolum
L898_g9580
I
0.967
GPLIN_000628500
Globodera pallida
GPLIN_000628500
N
0.967
GPLIN_000805100
Globodera pallida
GPLIN_000805100
N
0.967
L892_g8146
Steinernema scapterisci
L892_g8146
N
0.960
L889_g16048
Steinernema feltiae
L889_g16048
N
0.958
L596_g24910
Steinernema carpocapsae
L596_g24910
N
0.956
TCNE_0001892601
Toxocara canis
TCNE_0001892601
N
0.948
ACAC_0000388601
Angiostrongylus cantonensis
ACAC_0000388601
N
0.941
ASU_03038
Ascaris suum
ASU_03038
N
0.940
scaffold28-EXSNAP2012.86
Pristionchus exspectatus
scaffold28-EXSNAP2012.86
N
0.930
ASIM_0000109601
Anisakis simplex
ASIM_0000109601
N
0.914
CBN03769
Caenorhabditis brenneri
CBN03769
I
0.874
GPLIN_000989800
Globodera pallida
GPLIN_000989800
N
0.859
SMUV_0000909301
Syphacia muris
SMUV_0000909301
I
0.857
CBN03149
Caenorhabditis brenneri
CBN03149
N
0.851
nhr-33
Caenorhabditis elegans
WBGene00013976
N
0.851
L892_g10708
Steinernema scapterisci
L892_g10708
I
0.846
CBG17366
Caenorhabditis briggsae
CBG17366
N
0.845
CRE18529
Caenorhabditis remanei
CRE18529
I
0.841
EVEC_0001095701
Enterobius vermicularis
EVEC_0001095701
I
0.839
CBG12152
Caenorhabditis briggsae
CBG12152
I
0.839
PPA29361
Pristionchus pacificus
PPA29361
I
0.838
CBG04789
Caenorhabditis briggsae
CBG04789
I
0.836
BXY_1598800
Bursaphelenchus xylophilus
BXY_1598800
N
0.834
L596_g9106
Steinernema carpocapsae
L596_g9106
I
0.831
CBN18264
Caenorhabditis brenneri
CBN18264
I
0.826
nhr-86
Caenorhabditis elegans
WBGene00003676
D
0.820
L893_g2090
Steinernema glaseri
L893_g2090
I
0.818
nhr-53
Caenorhabditis elegans
WBGene00003643
I
0.816
L892_g8144
Steinernema scapterisci
L892_g8144
I
0.812
L898_g18539
Steinernema monticolum
L898_g18539
I
0.809
scaffold1235-EXSNAP2012.2
Pristionchus exspectatus
scaffold1235-EXSNAP2012.2
I
0.806
CRE09011
Caenorhabditis remanei
CRE09011
I
0.804
L596_g27786
Steinernema carpocapsae
L596_g27786
I
0.803
L893_g9516
Steinernema glaseri
L893_g9516
N
0.799
L898_g28806
Steinernema monticolum
L898_g28806
I
0.792
L889_g10781
Steinernema feltiae
L889_g10781
I
0.790
L889_g17146
Steinernema feltiae
L889_g17146
I
0.783
CBN04619
Caenorhabditis brenneri
CBN04619
I
0.776
SMUV_0000801801
Syphacia muris
SMUV_0000801801
I
0.756
CRE27175
Caenorhabditis remanei
CRE27175
N
0.753
L893_g9517
Steinernema glaseri
L893_g9517
I
0.745