SMUV_0000801801 (Syphacia muris)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SMUV_0000801801 T310424_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.870 0.600
nhr-70
M00695_2.00 		Caenorhabditis elegans
NYTGTAGYYD
HRRCTACARN		 PBM
Narasimhan et al.(2015)
pTH9174 		0.752 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000801801-mRNA-1 Nuclear receptor 7 90

Links

Other Nuclear receptor family TFs
Other Syphacia muris TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.977
L892_g8145 Steinernema scapterisci L892_g8145 I 0.970
L893_g4569 Steinernema glaseri L893_g4569 I 0.970
L889_g987 Steinernema feltiae L889_g987 I 0.965
L889_g9698 Steinernema feltiae L889_g9698 I 0.965
L893_g9517 Steinernema glaseri L893_g9517 I 0.959
L892_g8140 Steinernema scapterisci L892_g8140 I 0.956
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.955
L898_g10723 Steinernema monticolum L898_g10723 I 0.953
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.932
CJA10576 Caenorhabditis japonica CJA10576 I 0.931
CBG16375 Caenorhabditis briggsae CBG16375 I 0.931
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.923
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.921
L898_g28806 Steinernema monticolum L898_g28806 I 0.917
CRE18529 Caenorhabditis remanei CRE18529 I 0.914
L892_g8144 Steinernema scapterisci L892_g8144 I 0.913
CBG12152 Caenorhabditis briggsae CBG12152 I 0.910
CBN03769 Caenorhabditis brenneri CBN03769 I 0.905
CRE27659 Caenorhabditis remanei CRE27659 I 0.900
L893_g2090 Steinernema glaseri L893_g2090 I 0.896
CBN04619 Caenorhabditis brenneri CBN04619 I 0.893
L889_g10781 Steinernema feltiae L889_g10781 I 0.890
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.889
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.870
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.859
PPA08785 Pristionchus pacificus PPA08785 I 0.859
CJA04414 Caenorhabditis japonica CJA04414 I 0.857
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.857
CJA07390 Caenorhabditis japonica CJA07390 I 0.857
PPA10478 Pristionchus pacificus PPA10478 I 0.857
NECAME_01500 Necator americanus NECAME_01500 I 0.854
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.853
CBN16902 Caenorhabditis brenneri CBN16902 I 0.853
CRE17354 Caenorhabditis remanei CRE17354 I 0.837
CRE27174 Caenorhabditis remanei CRE27174 I 0.836
BXY_0777500 Bursaphelenchus xylophilus BXY_0777500 N 0.832
CBN24070 Caenorhabditis brenneri CBN24070 I 0.831
BXY_1598800 Bursaphelenchus xylophilus BXY_1598800 N 0.829
L892_g10708 Steinernema scapterisci L892_g10708 I 0.827
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.820
BXY_1188900 Bursaphelenchus xylophilus BXY_1188900 N 0.817
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.815
MhA1_Contig2502.frz3.gene1 Meloidogyne hapla MhA1_Contig2502.frz3.gene1 N 0.802
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.801
CRE17310 Caenorhabditis remanei CRE17310 I 0.796
GPLIN_001629700 Globodera pallida GPLIN_001629700 N 0.791
SMUV_0000241401 Syphacia muris SMUV_0000241401 I 0.786
CBN03440 Caenorhabditis brenneri CBN03440 I 0.786
nhr-16 Caenorhabditis elegans WBGene00003615 I 0.772
CBG03687 Caenorhabditis briggsae CBG03687 I 0.770
SPAL_0001578700 Strongyloides papillosus SPAL_0001578700 N 0.758
SVE_0983600 Strongyloides venezuelensis SVE_0983600 N 0.758
CBG20699 Caenorhabditis briggsae CBG20699 I 0.757
BXY_0973100 Bursaphelenchus xylophilus BXY_0973100 I 0.756
CRE17355 Caenorhabditis remanei CRE17355 I 0.756
nhr-70 Caenorhabditis elegans WBGene00003660 D 0.752
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.750
CRE07801 Caenorhabditis remanei CRE07801 I 0.748