L892_g10708 (Steinernema scapterisci)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L892_g10708 T309158_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.865 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L892_g10708.t1 Nuclear receptor 10 80

Links

Other Nuclear receptor family TFs
Other Steinernema scapterisci TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.986
L898_g18539 Steinernema monticolum L898_g18539 I 0.930
L889_g17146 Steinernema feltiae L889_g17146 I 0.924
CBN03769 Caenorhabditis brenneri CBN03769 I 0.915
PPA08785 Pristionchus pacificus PPA08785 I 0.903
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.903
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.903
PPA10478 Pristionchus pacificus PPA10478 I 0.903
NECAME_01500 Necator americanus NECAME_01500 I 0.894
L898_g9580 Steinernema monticolum L898_g9580 I 0.884
CRE18529 Caenorhabditis remanei CRE18529 I 0.884
CBG12152 Caenorhabditis briggsae CBG12152 I 0.882
L893_g3450 Steinernema glaseri L893_g3450 N 0.878
L889_g16048 Steinernema feltiae L889_g16048 N 0.874
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.865
L596_g24910 Steinernema carpocapsae L596_g24910 N 0.862
CBN04619 Caenorhabditis brenneri CBN04619 I 0.862
L892_g8146 Steinernema scapterisci L892_g8146 N 0.862
L893_g9517 Steinernema glaseri L893_g9517 I 0.859
L892_g8140 Steinernema scapterisci L892_g8140 I 0.858
CBG16375 Caenorhabditis briggsae CBG16375 I 0.853
CJA10576 Caenorhabditis japonica CJA10576 I 0.848
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.848
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.847
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.847
BXY_0973100 Bursaphelenchus xylophilus BXY_0973100 I 0.846
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.843
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.841
GPLIN_000628500 Globodera pallida GPLIN_000628500 N 0.841
GPLIN_000805100 Globodera pallida GPLIN_000805100 N 0.841
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.840
CRE27659 Caenorhabditis remanei CRE27659 I 0.834
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.827
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.824
PPA29361 Pristionchus pacificus PPA29361 I 0.818
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.812
L889_g987 Steinernema feltiae L889_g987 I 0.806
L889_g9698 Steinernema feltiae L889_g9698 I 0.806
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.805
L898_g28806 Steinernema monticolum L898_g28806 I 0.799
L893_g2090 Steinernema glaseri L893_g2090 I 0.798
CBN24070 Caenorhabditis brenneri CBN24070 I 0.794
L898_g10723 Steinernema monticolum L898_g10723 I 0.794
ASU_03038 Ascaris suum ASU_03038 N 0.785
L893_g4569 Steinernema glaseri L893_g4569 I 0.783
L892_g8145 Steinernema scapterisci L892_g8145 I 0.782
L892_g8144 Steinernema scapterisci L892_g8144 I 0.775
TCNE_0001892601 Toxocara canis TCNE_0001892601 N 0.773
CJA07390 Caenorhabditis japonica CJA07390 I 0.772
CJA04414 Caenorhabditis japonica CJA04414 I 0.772
CRE17354 Caenorhabditis remanei CRE17354 I 0.771
CBG03687 Caenorhabditis briggsae CBG03687 I 0.769
L889_g10781 Steinernema feltiae L889_g10781 I 0.762
SSTP_0000309200 Strongyloides stercoralis SSTP_0000309200 N 0.749