L898_g28806 (Steinernema monticolum)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L898_g28806 T309479_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.840 0.529
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L898_g28806.t1 Nuclear receptor 2 71

Links

Other Nuclear receptor family TFs
Other Steinernema monticolum TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.985
L892_g8144 Steinernema scapterisci L892_g8144 I 0.983
L893_g2090 Steinernema glaseri L893_g2090 I 0.982
L889_g10781 Steinernema feltiae L889_g10781 I 0.968
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.917
CBN04619 Caenorhabditis brenneri CBN04619 I 0.896
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.889
L892_g8140 Steinernema scapterisci L892_g8140 I 0.887
CBG16375 Caenorhabditis briggsae CBG16375 I 0.885
L893_g4569 Steinernema glaseri L893_g4569 I 0.884
L892_g8145 Steinernema scapterisci L892_g8145 I 0.884
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.884
CRE18529 Caenorhabditis remanei CRE18529 I 0.883
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.882
CJA10576 Caenorhabditis japonica CJA10576 I 0.880
L889_g9698 Steinernema feltiae L889_g9698 I 0.879
L889_g987 Steinernema feltiae L889_g987 I 0.879
L893_g9517 Steinernema glaseri L893_g9517 I 0.878
CBG12152 Caenorhabditis briggsae CBG12152 I 0.877
CBN03769 Caenorhabditis brenneri CBN03769 I 0.874
CRE27659 Caenorhabditis remanei CRE27659 I 0.870
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.868
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.840
L898_g10723 Steinernema monticolum L898_g10723 I 0.839
BXY_1188800 Bursaphelenchus xylophilus BXY_1188800 N 0.837
GPLIN_000628500 Globodera pallida GPLIN_000628500 N 0.835
GPLIN_000805100 Globodera pallida GPLIN_000805100 N 0.835
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.834
L898_g18539 Steinernema monticolum L898_g18539 I 0.834
CJA07390 Caenorhabditis japonica CJA07390 I 0.830
CJA04414 Caenorhabditis japonica CJA04414 I 0.830
PPA08785 Pristionchus pacificus PPA08785 I 0.818
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.818
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.815
PPA10478 Pristionchus pacificus PPA10478 I 0.815
nhr-53 Caenorhabditis elegans WBGene00003643 I 0.814
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.813
CRE09011 Caenorhabditis remanei CRE09011 I 0.811
L892_g10708 Steinernema scapterisci L892_g10708 I 0.799
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.796
BXY_0973100 Bursaphelenchus xylophilus BXY_0973100 I 0.792
CRE17354 Caenorhabditis remanei CRE17354 I 0.781
CBN24070 Caenorhabditis brenneri CBN24070 I 0.780
CBG04789 Caenorhabditis briggsae CBG04789 I 0.780
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.772
ASIM_0000109601 Anisakis simplex ASIM_0000109601 N 0.769
CBN18264 Caenorhabditis brenneri CBN18264 I 0.768
MhA1_Contig1462.frz3.gene15 Meloidogyne hapla MhA1_Contig1462.frz3.gene15 I 0.768
CBN16902 Caenorhabditis brenneri CBN16902 I 0.762
BXY_1188900 Bursaphelenchus xylophilus BXY_1188900 N 0.761
L898_g9580 Steinernema monticolum L898_g9580 I 0.749
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.749
L893_g3450 Steinernema glaseri L893_g3450 N 0.747
NECAME_01500 Necator americanus NECAME_01500 I 0.747
CBG03687 Caenorhabditis briggsae CBG03687 I 0.746