CBN18264 (Caenorhabditis brenneri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBN18264 T301791_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.765 0.614
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN18264 Nuclear receptor 20 89

Links

Other Nuclear receptor family TFs
Other Caenorhabditis brenneri TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG04789 Caenorhabditis briggsae CBG04789 I 0.988
CRE09011 Caenorhabditis remanei CRE09011 I 0.985
nhr-53 Caenorhabditis elegans WBGene00003643 I 0.981
L889_g10781 Steinernema feltiae L889_g10781 I 0.885
ASIM_0000109601 Anisakis simplex ASIM_0000109601 N 0.884
TCNE_0001892601 Toxocara canis TCNE_0001892601 N 0.869
CBG17366 Caenorhabditis briggsae CBG17366 N 0.868
nhr-205 Caenorhabditis elegans WBGene00011002 N 0.863
CRE27175 Caenorhabditis remanei CRE27175 N 0.843
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.840
CBN03769 Caenorhabditis brenneri CBN03769 I 0.831
CBN16902 Caenorhabditis brenneri CBN16902 I 0.829
BXY_0973100 Bursaphelenchus xylophilus BXY_0973100 I 0.826
ASU_03038 Ascaris suum ASU_03038 N 0.820
L898_g9580 Steinernema monticolum L898_g9580 I 0.816
BXY_1598800 Bursaphelenchus xylophilus BXY_1598800 N 0.815
CJA10576 Caenorhabditis japonica CJA10576 I 0.809
PPA29361 Pristionchus pacificus PPA29361 I 0.808
L893_g3450 Steinernema glaseri L893_g3450 N 0.806
CRE27174 Caenorhabditis remanei CRE27174 I 0.805
L889_g16048 Steinernema feltiae L889_g16048 N 0.802
L892_g8146 Steinernema scapterisci L892_g8146 N 0.802
L893_g2090 Steinernema glaseri L893_g2090 I 0.801
CBG16375 Caenorhabditis briggsae CBG16375 I 0.800
scaffold28-EXSNAP2012.86 Pristionchus exspectatus scaffold28-EXSNAP2012.86 N 0.797
CBN15963 Caenorhabditis brenneri CBN15963 N 0.796
L596_g24910 Steinernema carpocapsae L596_g24910 N 0.795
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.794
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.789
CBN04619 Caenorhabditis brenneri CBN04619 I 0.787
BXY_1188900 Bursaphelenchus xylophilus BXY_1188900 N 0.784
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.782
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.781
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.781
L889_g987 Steinernema feltiae L889_g987 I 0.778
L889_g9698 Steinernema feltiae L889_g9698 I 0.778
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.775
L892_g8144 Steinernema scapterisci L892_g8144 I 0.772
GPLIN_000805100 Globodera pallida GPLIN_000805100 N 0.771
GPLIN_000628500 Globodera pallida GPLIN_000628500 N 0.771
L898_g28806 Steinernema monticolum L898_g28806 I 0.768
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.765
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.756
L893_g4569 Steinernema glaseri L893_g4569 I 0.751
L892_g8145 Steinernema scapterisci L892_g8145 I 0.748
CRE18529 Caenorhabditis remanei CRE18529 I 0.747
CBG12152 Caenorhabditis briggsae CBG12152 I 0.747
CRE07801 Caenorhabditis remanei CRE07801 I 0.746