CBG04789 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG04789 T301458_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.771 0.600
nhr-70
M00695_2.00 		Caenorhabditis elegans
NYTGTAGYYD
HRRCTACARN		 PBM
Narasimhan et al.(2015)
pTH9174 		0.746 0.614
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG04789 Nuclear receptor 16 85

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN18264 Caenorhabditis brenneri CBN18264 I 0.988
CRE09011 Caenorhabditis remanei CRE09011 I 0.983
nhr-53 Caenorhabditis elegans WBGene00003643 I 0.983
L889_g10781 Steinernema feltiae L889_g10781 I 0.892
ASIM_0000109601 Anisakis simplex ASIM_0000109601 N 0.891
TCNE_0001892601 Toxocara canis TCNE_0001892601 N 0.877
CBG17366 Caenorhabditis briggsae CBG17366 N 0.868
nhr-205 Caenorhabditis elegans WBGene00011002 N 0.859
CRE27175 Caenorhabditis remanei CRE27175 N 0.853
BXY_0973100 Bursaphelenchus xylophilus BXY_0973100 I 0.836
CBN03769 Caenorhabditis brenneri CBN03769 I 0.831
ASU_03038 Ascaris suum ASU_03038 N 0.830
L898_g9580 Steinernema monticolum L898_g9580 I 0.826
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.820
L893_g3450 Steinernema glaseri L893_g3450 N 0.816
CJA10576 Caenorhabditis japonica CJA10576 I 0.815
L889_g16048 Steinernema feltiae L889_g16048 N 0.813
L892_g8146 Steinernema scapterisci L892_g8146 N 0.813
L893_g2090 Steinernema glaseri L893_g2090 I 0.812
CBN16902 Caenorhabditis brenneri CBN16902 I 0.808
L596_g24910 Steinernema carpocapsae L596_g24910 N 0.806
scaffold28-EXSNAP2012.86 Pristionchus exspectatus scaffold28-EXSNAP2012.86 N 0.802
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.801
CBG16375 Caenorhabditis briggsae CBG16375 I 0.800
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.794
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.794
CBN04619 Caenorhabditis brenneri CBN04619 I 0.793
BXY_1598800 Bursaphelenchus xylophilus BXY_1598800 N 0.793
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.792
CBN15963 Caenorhabditis brenneri CBN15963 N 0.790
L889_g9698 Steinernema feltiae L889_g9698 I 0.790
L889_g987 Steinernema feltiae L889_g987 I 0.790
BXY_1188900 Bursaphelenchus xylophilus BXY_1188900 N 0.790
PPA29361 Pristionchus pacificus PPA29361 I 0.785
L892_g8144 Steinernema scapterisci L892_g8144 I 0.784
GPLIN_000628500 Globodera pallida GPLIN_000628500 N 0.783
GPLIN_000805100 Globodera pallida GPLIN_000805100 N 0.783
CRE27174 Caenorhabditis remanei CRE27174 I 0.781
L898_g28806 Steinernema monticolum L898_g28806 I 0.780
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.771
L893_g4569 Steinernema glaseri L893_g4569 I 0.764
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.762
L892_g8145 Steinernema scapterisci L892_g8145 I 0.761
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.756
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.749
CBG12152 Caenorhabditis briggsae CBG12152 I 0.747
CRE18529 Caenorhabditis remanei CRE18529 I 0.747
nhr-70 Caenorhabditis elegans WBGene00003660 D 0.746
CRE07801 Caenorhabditis remanei CRE07801 I 0.746