PPA29361 (Pristionchus pacificus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 PPA29361 T305941_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.892 0.643
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA29361 Nuclear receptor 10 80

Links

Other Nuclear receptor family TFs
Other Pristionchus pacificus TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.989
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.905
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.892
CRE18529 Caenorhabditis remanei CRE18529 I 0.885
CBG12152 Caenorhabditis briggsae CBG12152 I 0.885
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.881
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.877
CBN03769 Caenorhabditis brenneri CBN03769 I 0.875
nhr-16 Caenorhabditis elegans WBGene00003615 I 0.875
NECAME_01500 Necator americanus NECAME_01500 I 0.874
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.865
L898_g9580 Steinernema monticolum L898_g9580 I 0.861
CBN04619 Caenorhabditis brenneri CBN04619 I 0.854
L893_g3450 Steinernema glaseri L893_g3450 N 0.845
nhr-33 Caenorhabditis elegans WBGene00013976 N 0.839
BXY_0973100 Bursaphelenchus xylophilus BXY_0973100 I 0.838
CBN03149 Caenorhabditis brenneri CBN03149 N 0.837
L889_g17146 Steinernema feltiae L889_g17146 I 0.831
L889_g16048 Steinernema feltiae L889_g16048 N 0.830
CBG16375 Caenorhabditis briggsae CBG16375 I 0.823
L892_g8146 Steinernema scapterisci L892_g8146 N 0.822
L596_g24910 Steinernema carpocapsae L596_g24910 N 0.822
L892_g10708 Steinernema scapterisci L892_g10708 I 0.818
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.817
scaffold861-EXSNAP2012.4 Pristionchus exspectatus scaffold861-EXSNAP2012.4 N 0.816
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.815
CRE27659 Caenorhabditis remanei CRE27659 I 0.815
CJA10576 Caenorhabditis japonica CJA10576 I 0.812
CBN18264 Caenorhabditis brenneri CBN18264 I 0.808
CRE17354 Caenorhabditis remanei CRE17354 I 0.807
CRE17310 Caenorhabditis remanei CRE17310 I 0.806
CBG03687 Caenorhabditis briggsae CBG03687 I 0.804
SMUV_0000721901 Syphacia muris SMUV_0000721901 I 0.801
scaffold1278-EXSNAP2012.5 Pristionchus exspectatus scaffold1278-EXSNAP2012.5 N 0.800
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.799
CRE27174 Caenorhabditis remanei CRE27174 I 0.792
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.791
CBN24070 Caenorhabditis brenneri CBN24070 I 0.786
CBG04789 Caenorhabditis briggsae CBG04789 I 0.785
PPA08785 Pristionchus pacificus PPA08785 I 0.784
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.784
PPA10478 Pristionchus pacificus PPA10478 I 0.784
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.784
PPA13604 Pristionchus pacificus PPA13604 N 0.784
CRE09011 Caenorhabditis remanei CRE09011 I 0.778
PTRK_0000945400 Parastrongyloides trichosuri PTRK_0000945400 N 0.776
TCNE_0001892601 Toxocara canis TCNE_0001892601 N 0.775
ASU_03038 Ascaris suum ASU_03038 N 0.775
GPLIN_000628500 Globodera pallida GPLIN_000628500 N 0.774
GPLIN_000805100 Globodera pallida GPLIN_000805100 N 0.774
CBN16902 Caenorhabditis brenneri CBN16902 I 0.772
nhr-53 Caenorhabditis elegans WBGene00003643 I 0.768
ASIM_0000109601 Anisakis simplex ASIM_0000109601 N 0.767
ACAC_0000388601 Angiostrongylus cantonensis ACAC_0000388601 N 0.765
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.762
scaffold28-EXSNAP2012.86 Pristionchus exspectatus scaffold28-EXSNAP2012.86 N 0.762
CBG03688 Caenorhabditis briggsae CBG03688 I 0.758
CBG17366 Caenorhabditis briggsae CBG17366 N 0.757
L893_g9517 Steinernema glaseri L893_g9517 I 0.755
L892_g8140 Steinernema scapterisci L892_g8140 I 0.754
CBN03440 Caenorhabditis brenneri CBN03440 I 0.748
CRE27175 Caenorhabditis remanei CRE27175 N 0.747