CBG16375 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG16375 T301551_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.917 0.657
nhr-70
M00695_2.00 		Caenorhabditis elegans
NYTGTAGYYD
HRRCTACARN		 PBM
Narasimhan et al.(2015)
pTH9174 		0.894 0.729
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG16375 Nuclear receptor 6 75

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.985
CJA10576 Caenorhabditis japonica CJA10576 I 0.981
CRE27659 Caenorhabditis remanei CRE27659 I 0.975
CBN04619 Caenorhabditis brenneri CBN04619 I 0.973
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.938
CRE18529 Caenorhabditis remanei CRE18529 I 0.937
CBG12152 Caenorhabditis briggsae CBG12152 I 0.937
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.931
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.924
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.923
CBN16902 Caenorhabditis brenneri CBN16902 I 0.922
CJA04414 Caenorhabditis japonica CJA04414 I 0.922
CBN03769 Caenorhabditis brenneri CBN03769 I 0.922
CJA07390 Caenorhabditis japonica CJA07390 I 0.922
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.917
CRE27174 Caenorhabditis remanei CRE27174 I 0.910
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.908
nhr-70 Caenorhabditis elegans WBGene00003660 D 0.894
CRE07801 Caenorhabditis remanei CRE07801 I 0.894
L892_g8145 Steinernema scapterisci L892_g8145 I 0.890
L893_g4569 Steinernema glaseri L893_g4569 I 0.890
CBG20699 Caenorhabditis briggsae CBG20699 I 0.890
L893_g9517 Steinernema glaseri L893_g9517 I 0.887
L898_g28806 Steinernema monticolum L898_g28806 I 0.885
CBN24070 Caenorhabditis brenneri CBN24070 I 0.885
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.885
L892_g8144 Steinernema scapterisci L892_g8144 I 0.882
CRE17354 Caenorhabditis remanei CRE17354 I 0.877
L892_g8140 Steinernema scapterisci L892_g8140 I 0.875
CBG03687 Caenorhabditis briggsae CBG03687 I 0.872
L893_g2090 Steinernema glaseri L893_g2090 I 0.869
L889_g987 Steinernema feltiae L889_g987 I 0.868
L889_g9698 Steinernema feltiae L889_g9698 I 0.868
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.861
PPA10478 Pristionchus pacificus PPA10478 I 0.856
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.856
PPA08785 Pristionchus pacificus PPA08785 I 0.856
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.856
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.853
L892_g10708 Steinernema scapterisci L892_g10708 I 0.853
CRE17310 Caenorhabditis remanei CRE17310 I 0.851
L889_g10781 Steinernema feltiae L889_g10781 I 0.849
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.848
L898_g10723 Steinernema monticolum L898_g10723 I 0.844
nhr-53 Caenorhabditis elegans WBGene00003643 I 0.840
CBN03440 Caenorhabditis brenneri CBN03440 I 0.839
nhr-16 Caenorhabditis elegans WBGene00003615 I 0.837
NECAME_01500 Necator americanus NECAME_01500 I 0.832
CRE09011 Caenorhabditis remanei CRE09011 I 0.828
PPA29361 Pristionchus pacificus PPA29361 I 0.823
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.814
CRE17355 Caenorhabditis remanei CRE17355 I 0.812
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.809
CBN18264 Caenorhabditis brenneri CBN18264 I 0.800
CBG04789 Caenorhabditis briggsae CBG04789 I 0.800
ASIM_0000109601 Anisakis simplex ASIM_0000109601 N 0.779
L898_g18539 Steinernema monticolum L898_g18539 I 0.765
TCNE_0001892601 Toxocara canis TCNE_0001892601 N 0.764
BXY_1188800 Bursaphelenchus xylophilus BXY_1188800 N 0.756