L892_g8145 (Steinernema scapterisci)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L892_g8145 T309308_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.857 0.571
nhr-70
M00695_2.00 		Caenorhabditis elegans
NYTGTAGYYD
HRRCTACARN		 PBM
Narasimhan et al.(2015)
pTH9174 		0.810 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L892_g8145.t1 Nuclear receptor 3 72

Links

Other Nuclear receptor family TFs
Other Steinernema scapterisci TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L893_g4569 Steinernema glaseri L893_g4569 I 0.990
L889_g9698 Steinernema feltiae L889_g9698 I 0.985
L889_g987 Steinernema feltiae L889_g987 I 0.985
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.970
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.960
L892_g8140 Steinernema scapterisci L892_g8140 I 0.958
L893_g9517 Steinernema glaseri L893_g9517 I 0.954
L898_g10723 Steinernema monticolum L898_g10723 I 0.947
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.926
L889_g10781 Steinernema feltiae L889_g10781 I 0.922
CBN16902 Caenorhabditis brenneri CBN16902 I 0.909
CRE18529 Caenorhabditis remanei CRE18529 I 0.905
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.905
CBG12152 Caenorhabditis briggsae CBG12152 I 0.900
L892_g8144 Steinernema scapterisci L892_g8144 I 0.897
BXY_1598800 Bursaphelenchus xylophilus BXY_1598800 N 0.893
CRE27174 Caenorhabditis remanei CRE27174 I 0.893
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.892
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.891
CBG16375 Caenorhabditis briggsae CBG16375 I 0.890
CBN03769 Caenorhabditis brenneri CBN03769 I 0.887
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.886
L898_g28806 Steinernema monticolum L898_g28806 I 0.884
CJA10576 Caenorhabditis japonica CJA10576 I 0.884
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.882
L893_g2090 Steinernema glaseri L893_g2090 I 0.861
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.857
CRE27659 Caenorhabditis remanei CRE27659 I 0.850
BXY_0777500 Bursaphelenchus xylophilus BXY_0777500 N 0.846
PPA10478 Pristionchus pacificus PPA10478 I 0.844
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.844
PPA08785 Pristionchus pacificus PPA08785 I 0.844
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.844
CJA07390 Caenorhabditis japonica CJA07390 I 0.840
CJA04414 Caenorhabditis japonica CJA04414 I 0.840
CBN04619 Caenorhabditis brenneri CBN04619 I 0.838
BXY_1188900 Bursaphelenchus xylophilus BXY_1188900 N 0.829
CRE17354 Caenorhabditis remanei CRE17354 I 0.826
NECAME_01500 Necator americanus NECAME_01500 I 0.823
ASIM_0000109601 Anisakis simplex ASIM_0000109601 N 0.822
CBG20699 Caenorhabditis briggsae CBG20699 I 0.816
CBN24070 Caenorhabditis brenneri CBN24070 I 0.814
nhr-70 Caenorhabditis elegans WBGene00003660 D 0.810
CRE07801 Caenorhabditis remanei CRE07801 I 0.809
PEQ_0000776301 Parascaris equorum PEQ_0000776301 N 0.808
ASIM_0001623901 Anisakis simplex ASIM_0001623901 N 0.796
CRE09011 Caenorhabditis remanei CRE09011 I 0.794
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.787
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.786
nhr-53 Caenorhabditis elegans WBGene00003643 I 0.785
CRE17310 Caenorhabditis remanei CRE17310 I 0.783
L892_g10708 Steinernema scapterisci L892_g10708 I 0.782
CBN03440 Caenorhabditis brenneri CBN03440 I 0.772
TCNE_0001892601 Toxocara canis TCNE_0001892601 N 0.772
TCNE_0000117601 Toxocara canis TCNE_0000117601 N 0.769
MhA1_Contig2502.frz3.gene1 Meloidogyne hapla MhA1_Contig2502.frz3.gene1 N 0.768
CBG04789 Caenorhabditis briggsae CBG04789 I 0.761
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.759
CBG03687 Caenorhabditis briggsae CBG03687 I 0.756
CRE27175 Caenorhabditis remanei CRE27175 N 0.750
SMUV_0000241401 Syphacia muris SMUV_0000241401 I 0.750
nhr-205 Caenorhabditis elegans WBGene00011002 N 0.749
CBN18264 Caenorhabditis brenneri CBN18264 I 0.748