ENSGACG00000007469 (Gasterosteus aculeatus)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 ENSGACG00000007469 T313556_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSGACG00000007469
M02432_2.00		 Gasterosteus aculeatus
NVNMGAWACH
DGTWTCKNBN		 PBM
Weirauch et al.(2014)
pTH9179		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSACAG00000012432
M02430_2.00 		Anolis carolinensis
NNNCNAAWNN
NNWTTNGNNN		 PBM
Weirauch et al.(2014)
pTH9220 		0.864 0.864
ENSORLG00000007805
M02435_2.00 		Oryzias latipes
SCNAAWNNNN
NNNNWTTNGS		 PBM
Weirauch et al.(2014)
pTH9277 		0.864 0.864
ENSMGAG00000009953
M02433_2.00 		Meleagris gallopavo
NNNYNAAWNN
NNWTTNRNNN		 PBM
Weirauch et al.(2014)
pTH8649 		0.841 0.841
lcorl
M02438_2.00 		Xenopus tropicalis
NYCNAAWHN
NDWTTNGRN		 PBM
Weirauch et al.(2014)
pTH8558 		0.841 0.841
ENSORLG00000000044
M02434_2.00 		Oryzias latipes
CCCAAAWT
AWTTTGGG		 PBM
Weirauch et al.(2014)
pTH9275 		0.795 0.795
For this family, TFs with SR scores > 0.778 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02432_2.00 Pipsqueak 52 96

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000009917 Pipsqueak 494 538

Links

Other Pipsqueak family TFs
Other Gasterosteus aculeatus TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSGMOG00000018278 Gadus morhua ENSGMOG00000018278 I 0.909
ENSXMAG00000002515 Xiphophorus maculatus ENSXMAG00000002515 I 0.909
ENSONIG00000018331 Oreochromis niloticus ENSONIG00000018331 I 0.909
ENSPFOG00000013017 Poecilia formosa ENSPFOG00000013017 I 0.909
ENSTRUG00000008704 Takifugu rubripes ENSTRUG00000008704 I 0.886
ENSACAG00000012432 Anolis carolinensis ENSACAG00000012432 D 0.864
ENSAMXG00000021599 Astyanax mexicanus ENSAMXG00000021599 I 0.864
ENSORLG00000007805 Oryzias latipes ENSORLG00000007805 D 0.864
ENSSTOG00000010808 Ictidomys tridecemlineatus ENSSTOG00000010808 I 0.841
ENSSSCG00000010511 Sus scrofa ENSSSCG00000010511 I 0.841
ENSTBEG00000005837 Tupaia belangeri ENSTBEG00000005837 I 0.841
Lcor Rattus norvegicus ENSRNOG00000042679 I 0.841
ENSPSIG00000009179 Pelodiscus sinensis ENSPSIG00000009179 I 0.841
ENSPCAG00000007084 Procavia capensis ENSPCAG00000007084 I 0.841
LCOR Pan troglodytes ENSPTRG00000002800 I 0.841
ENSPVAG00000003364 Pteropus vampyrus ENSPVAG00000003364 I 0.841
ENSSARG00000008230 Sorex araneus ENSSARG00000008230 I 0.841
ENSTGUG00000009834 Taeniopygia guttata ENSTGUG00000009834 I 0.841
ENSSHAG00000018667 Sarcophilus harrisii ENSSHAG00000018667 I 0.841
ENSTTRG00000009856 Tursiops truncatus ENSTTRG00000009856 I 0.841
Myotis_brandtii_LCOR_10025723 Myotis brandtii Myotis_brandtii_LCOR_10025723 I 0.841
Gfo_R002325 Geospiza fortis Gfo_R002325 I 0.841
Ogr16502 Ophisaurus gracilis Ogr16502 I 0.841
Pvit_17823 Pogona vitticeps Pvit_17823 I 0.841
Tal_R010723 Tyto alba Tal_R010723 I 0.841
ENSP00000360138 Macaca fascicularis ENSP00000360138 I 0.841
ENSBTAP00000005261-D1 Bos grunniens ENSBTAP00000005261-D1 I 0.841
Afo_R002709 Aptenodytes forsteri Afo_R002709 I 0.841
Aan_R012556 Calypte anna Aan_R012556 I 0.841
Alligator_sinensis_CCG020164.1 Alligator sinensis Alligator_sinensis_CCG020164.1 I 0.841
Brh_R001506 Buceros rhinoceros Brh_R001506 I 0.841
Cmyd_10003742 Chelonia mydas Cmyd_10003742 I 0.841
ENSVPAG00000007583 Vicugna pacos ENSVPAG00000007583 I 0.841
ENSOPRG00000014745 Ochotona princeps ENSOPRG00000014745 I 0.841
ENSECAG00000013517 Equus caballus ENSECAG00000013517 I 0.841
ENSCSAG00000006043 Chlorocebus sabaeus ENSCSAG00000006043 I 0.841
ENSETEG00000015066 Echinops telfairi ENSETEG00000015066 I 0.841
ENSFALG00000008484 Ficedula albicollis ENSFALG00000008484 I 0.841
LCOR Homo sapiens ENSG00000196233 I 0.841
ENSFCAG00000028121 Felis catus ENSFCAG00000028121 I 0.841
ENSCPOG00000005739 Cavia porcellus ENSCPOG00000005739 I 0.841
ENSCJAG00000016484 Callithrix jacchus ENSCJAG00000016484 I 0.841
ENSAPLG00000003032 Anas platyrhynchos ENSAPLG00000003032 I 0.841
ENSAMEG00000000186 Ailuropoda melanoleuca ENSAMEG00000000186 I 0.841
ENSBTAG00000004029 Bos taurus ENSBTAG00000004029 I 0.841
ENSCAFG00000008905 Canis familiaris ENSCAFG00000008905 I 0.841
ENSCHOG00000001981 Choloepus hoffmanni ENSCHOG00000001981 I 0.841
ENSOGAG00000008137 Otolemur garnettii ENSOGAG00000008137 I 0.841
ENSGALG00000023649 Gallus gallus ENSGALG00000023649 I 0.841
ENSMMUG00000010425 Macaca mulatta ENSMMUG00000010425 I 0.841
ENSMLUG00000000494 Myotis lucifugus ENSMLUG00000000494 I 0.841
ENSMODG00000004531 Monodelphis domestica ENSMODG00000004531 I 0.841
Lcor Mus musculus ENSMUSG00000025019 I 0.841
ENSOARG00000008725 Ovis aries ENSOARG00000008725 I 0.841
ENSNLEG00000013648 Nomascus leucogenys ENSNLEG00000013648 I 0.841
ENSMICG00000007572 Microcebus murinus ENSMICG00000007572 I 0.841
ENSMGAG00000009953 Meleagris gallopavo ENSMGAG00000009953 D 0.841
ENSGGOG00000026110 Gorilla gorilla ENSGGOG00000026110 I 0.841
ENSLAFG00000014271 Loxodonta africana ENSLAFG00000014271 I 0.841
lcorl Xenopus tropicalis XB-GENE-995017 D 0.822
ENSLOCG00000012823 Lepisosteus oculatus ENSLOCG00000012823 I 0.822
ENSLACG00000001265 Latimeria chalumnae ENSLACG00000001265 I 0.822
lcor Danio rerio ENSDARG00000100908 I 0.800
lcor Takifugu rubripes ENSTRUG00000006194 I 0.795
lcor Tetraodon nigroviridis ENSTNIG00000003614 I 0.795