ENSORLG00000000044 (Oryzias latipes)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 ENSORLG00000000044 T313595_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSORLG00000000044
M02434_2.00		 Oryzias latipes
CCCAAAWT
AWTTTGGG		 PBM
Weirauch et al.(2014)
pTH9275		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSMGAG00000009953
M02433_2.00 		Meleagris gallopavo
NNNYNAAWNN
NNWTTNRNNN		 PBM
Weirauch et al.(2014)
pTH8649 		0.911 0.911
lcorl
M02438_2.00 		Xenopus tropicalis
NYCNAAWHN
NDWTTNGRN		 PBM
Weirauch et al.(2014)
pTH8558 		0.911 0.911
ENSACAG00000012432
M02430_2.00 		Anolis carolinensis
NNNCNAAWNN
NNWTTNGNNN		 PBM
Weirauch et al.(2014)
pTH9220 		0.867 0.867
LCORL
M02431_2.00 		Choloepus hoffmanni
NNYNAAHNN
NNDTTNRNN		 PBM
Weirauch et al.(2014)
pTH9253 		0.800 0.800
ENSORLG00000007805
M02435_2.00 		Oryzias latipes
SCNAAWNNNN
NNNNWTTNGS		 PBM
Weirauch et al.(2014)
pTH9277 		0.800 0.800
For this family, TFs with SR scores > 0.778 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02434_2.00 Pipsqueak 51 96

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000000051 Pipsqueak 124 169

Links

Other Pipsqueak family TFs
Other Oryzias latipes TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPFOG00000009902 Poecilia formosa ENSPFOG00000009902 I 1.000
ENSXMAG00000005637 Xiphophorus maculatus ENSXMAG00000005637 I 1.000
ENSONIG00000000255 Oreochromis niloticus ENSONIG00000000255 I 1.000
lcor Danio rerio ENSDARG00000100908 I 0.978
lcor Tetraodon nigroviridis ENSTNIG00000003614 I 0.956
lcor Takifugu rubripes ENSTRUG00000006194 I 0.956
ENSAMXG00000021599 Astyanax mexicanus ENSAMXG00000021599 I 0.933
ENSLOCG00000012823 Lepisosteus oculatus ENSLOCG00000012823 I 0.933
Lcor Rattus norvegicus ENSRNOG00000042679 I 0.911
ENSSHAG00000018667 Sarcophilus harrisii ENSSHAG00000018667 I 0.911
ENSSARG00000008230 Sorex araneus ENSSARG00000008230 I 0.911
LCOR Pan troglodytes ENSPTRG00000002800 I 0.911
ENSPCAG00000007084 Procavia capensis ENSPCAG00000007084 I 0.911
ENSOPRG00000014745 Ochotona princeps ENSOPRG00000014745 I 0.911
Ogr16502 Ophisaurus gracilis Ogr16502 I 0.911
ENSPSIG00000009179 Pelodiscus sinensis ENSPSIG00000009179 I 0.911
ENSSSCG00000010511 Sus scrofa ENSSSCG00000010511 I 0.911
ENSPVAG00000003364 Pteropus vampyrus ENSPVAG00000003364 I 0.911
ENSTGUG00000009834 Taeniopygia guttata ENSTGUG00000009834 I 0.911
Alligator_sinensis_CCG020164.1 Alligator sinensis Alligator_sinensis_CCG020164.1 I 0.911
Afo_R002709 Aptenodytes forsteri Afo_R002709 I 0.911
Brh_R001506 Buceros rhinoceros Brh_R001506 I 0.911
Cmyd_10003742 Chelonia mydas Cmyd_10003742 I 0.911
ENSBTAP00000005261-D1 Bos grunniens ENSBTAP00000005261-D1 I 0.911
Aan_R012556 Calypte anna Aan_R012556 I 0.911
Gfo_R002325 Geospiza fortis Gfo_R002325 I 0.911
Myotis_brandtii_LCOR_10025723 Myotis brandtii Myotis_brandtii_LCOR_10025723 I 0.911
ENSTBEG00000005837 Tupaia belangeri ENSTBEG00000005837 I 0.911
ENSP00000360138 Macaca fascicularis ENSP00000360138 I 0.911
ENSTTRG00000009856 Tursiops truncatus ENSTTRG00000009856 I 0.911
ENSVPAG00000007583 Vicugna pacos ENSVPAG00000007583 I 0.911
ENSSTOG00000010808 Ictidomys tridecemlineatus ENSSTOG00000010808 I 0.911
ENSOGAG00000008137 Otolemur garnettii ENSOGAG00000008137 I 0.911
ENSECAG00000013517 Equus caballus ENSECAG00000013517 I 0.911
ENSCSAG00000006043 Chlorocebus sabaeus ENSCSAG00000006043 I 0.911
ENSETEG00000015066 Echinops telfairi ENSETEG00000015066 I 0.911
ENSFALG00000008484 Ficedula albicollis ENSFALG00000008484 I 0.911
Tal_R010723 Tyto alba Tal_R010723 I 0.911
ENSFCAG00000028121 Felis catus ENSFCAG00000028121 I 0.911
ENSCPOG00000005739 Cavia porcellus ENSCPOG00000005739 I 0.911
ENSCJAG00000016484 Callithrix jacchus ENSCJAG00000016484 I 0.911
ENSAPLG00000003032 Anas platyrhynchos ENSAPLG00000003032 I 0.911
ENSAMEG00000000186 Ailuropoda melanoleuca ENSAMEG00000000186 I 0.911
ENSBTAG00000004029 Bos taurus ENSBTAG00000004029 I 0.911
ENSCAFG00000008905 Canis familiaris ENSCAFG00000008905 I 0.911
lcorl Xenopus tropicalis XB-GENE-995017 D 0.911
ENSCHOG00000001981 Choloepus hoffmanni ENSCHOG00000001981 I 0.911
LCOR Homo sapiens ENSG00000196233 I 0.911
ENSGALG00000023649 Gallus gallus ENSGALG00000023649 I 0.911
ENSMMUG00000010425 Macaca mulatta ENSMMUG00000010425 I 0.911
ENSMLUG00000000494 Myotis lucifugus ENSMLUG00000000494 I 0.911
ENSMODG00000004531 Monodelphis domestica ENSMODG00000004531 I 0.911
Lcor Mus musculus ENSMUSG00000025019 I 0.911
ENSNLEG00000013648 Nomascus leucogenys ENSNLEG00000013648 I 0.911
ENSOARG00000008725 Ovis aries ENSOARG00000008725 I 0.911
ENSMICG00000007572 Microcebus murinus ENSMICG00000007572 I 0.911
ENSLAFG00000014271 Loxodonta africana ENSLAFG00000014271 I 0.911
Pvit_17823 Pogona vitticeps Pvit_17823 I 0.911
ENSGGOG00000026110 Gorilla gorilla ENSGGOG00000026110 I 0.911
ENSMGAG00000009953 Meleagris gallopavo ENSMGAG00000009953 D 0.911
ENSLACG00000001265 Latimeria chalumnae ENSLACG00000001265 I 0.889
ENSACAG00000012432 Anolis carolinensis ENSACAG00000012432 D 0.867
ENSONIG00000018331 Oreochromis niloticus ENSONIG00000018331 I 0.822
ENSTRUG00000008704 Takifugu rubripes ENSTRUG00000008704 I 0.822
Myotis_brandtii_LCORL_10024398 Myotis brandtii Myotis_brandtii_LCORL_10024398 I 0.800
ENSORLG00000007805 Oryzias latipes ENSORLG00000007805 D 0.800
LCORL Homo sapiens ENSG00000178177 D 0.800
LCORL Choloepus hoffmanni ENSCHOG00000006922 D 0.800
ENSGMOG00000018278 Gadus morhua ENSGMOG00000018278 I 0.800
ENSPFOG00000013017 Poecilia formosa ENSPFOG00000013017 I 0.800
LCORL Tupaia belangeri ENSTBEG00000012926 I 0.800
ENSPMAG00000003112 Petromyzon marinus ENSPMAG00000003112 I 0.800
ENSXMAG00000002515 Xiphophorus maculatus ENSXMAG00000002515 I 0.800