Myotis_brandtii_LCORL_10024398 (Myotis brandtii)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 Myotis_brandtii_LCORL_10024398 T314458_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LCORL
M02431_2.00 		Choloepus hoffmanni
NNYNAAHNN
NNDTTNRNN		 PBM
Weirauch et al.(2014)
pTH9253 		1.000 1.000
ENSMGAG00000009953
M02433_2.00 		Meleagris gallopavo
NNNYNAAWNN
NNWTTNRNNN		 PBM
Weirauch et al.(2014)
pTH8649 		0.800 0.800
ENSORLG00000000044
M02434_2.00 		Oryzias latipes
CCCAAAWT
AWTTTGGG		 PBM
Weirauch et al.(2014)
pTH9275 		0.800 0.800
lcorl
M02438_2.00 		Xenopus tropicalis
NYCNAAWHN
NDWTTNGRN		 PBM
Weirauch et al.(2014)
pTH8558 		0.800 0.800
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Myotis_brandtii_LCORL_10024398 Pipsqueak 61 106

Links

Other Pipsqueak family TFs
Other Myotis brandtii TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LCORL Tupaia belangeri ENSTBEG00000012926 I 1.000
LCORL Choloepus hoffmanni ENSCHOG00000006922 D 1.000
LCORL Homo sapiens ENSG00000178177 D 1.000
lcor Danio rerio ENSDARG00000100908 I 0.822
ENSSTOG00000010808 Ictidomys tridecemlineatus ENSSTOG00000010808 I 0.800
ENSSSCG00000010511 Sus scrofa ENSSSCG00000010511 I 0.800
ENSTBEG00000005837 Tupaia belangeri ENSTBEG00000005837 I 0.800
lcorl Xenopus tropicalis XB-GENE-995017 D 0.800
ENSTTRG00000009856 Tursiops truncatus ENSTTRG00000009856 I 0.800
ENSTGUG00000009834 Taeniopygia guttata ENSTGUG00000009834 I 0.800
ENSSHAG00000018667 Sarcophilus harrisii ENSSHAG00000018667 I 0.800
ENSVPAG00000007583 Vicugna pacos ENSVPAG00000007583 I 0.800
LCOR Pan troglodytes ENSPTRG00000002800 I 0.800
ENSPSIG00000009179 Pelodiscus sinensis ENSPSIG00000009179 I 0.800
ENSPVAG00000003364 Pteropus vampyrus ENSPVAG00000003364 I 0.800
Lcor Rattus norvegicus ENSRNOG00000042679 I 0.800
ENSSARG00000008230 Sorex araneus ENSSARG00000008230 I 0.800
ENSPFOG00000009902 Poecilia formosa ENSPFOG00000009902 I 0.800
ENSXMAG00000005637 Xiphophorus maculatus ENSXMAG00000005637 I 0.800
Gfo_R002325 Geospiza fortis Gfo_R002325 I 0.800
ENSP00000360138 Macaca fascicularis ENSP00000360138 I 0.800
Tal_R010723 Tyto alba Tal_R010723 I 0.800
Myotis_brandtii_LCOR_10025723 Myotis brandtii Myotis_brandtii_LCOR_10025723 I 0.800
Ogr16502 Ophisaurus gracilis Ogr16502 I 0.800
ENSBTAP00000005261-D1 Bos grunniens ENSBTAP00000005261-D1 I 0.800
Cmyd_10003742 Chelonia mydas Cmyd_10003742 I 0.800
ENSPCAG00000007084 Procavia capensis ENSPCAG00000007084 I 0.800
Aan_R012556 Calypte anna Aan_R012556 I 0.800
Afo_R002709 Aptenodytes forsteri Afo_R002709 I 0.800
Alligator_sinensis_CCG020164.1 Alligator sinensis Alligator_sinensis_CCG020164.1 I 0.800
Brh_R001506 Buceros rhinoceros Brh_R001506 I 0.800
Pvit_17823 Pogona vitticeps Pvit_17823 I 0.800
ENSONIG00000000255 Oreochromis niloticus ENSONIG00000000255 I 0.800
ENSECAG00000013517 Equus caballus ENSECAG00000013517 I 0.800
ENSCSAG00000006043 Chlorocebus sabaeus ENSCSAG00000006043 I 0.800
ENSETEG00000015066 Echinops telfairi ENSETEG00000015066 I 0.800
ENSFALG00000008484 Ficedula albicollis ENSFALG00000008484 I 0.800
LCOR Homo sapiens ENSG00000196233 I 0.800
ENSFCAG00000028121 Felis catus ENSFCAG00000028121 I 0.800
ENSCPOG00000005739 Cavia porcellus ENSCPOG00000005739 I 0.800
ENSCJAG00000016484 Callithrix jacchus ENSCJAG00000016484 I 0.800
ENSAPLG00000003032 Anas platyrhynchos ENSAPLG00000003032 I 0.800
ENSAMXG00000021599 Astyanax mexicanus ENSAMXG00000021599 I 0.800
ENSBTAG00000004029 Bos taurus ENSBTAG00000004029 I 0.800
ENSCAFG00000008905 Canis familiaris ENSCAFG00000008905 I 0.800
ENSCHOG00000001981 Choloepus hoffmanni ENSCHOG00000001981 I 0.800
ENSGALG00000023649 Gallus gallus ENSGALG00000023649 I 0.800
ENSGGOG00000026110 Gorilla gorilla ENSGGOG00000026110 I 0.800
ENSNLEG00000013648 Nomascus leucogenys ENSNLEG00000013648 I 0.800
Lcor Mus musculus ENSMUSG00000025019 I 0.800
ENSOARG00000008725 Ovis aries ENSOARG00000008725 I 0.800
ENSOGAG00000008137 Otolemur garnettii ENSOGAG00000008137 I 0.800
ENSOPRG00000014745 Ochotona princeps ENSOPRG00000014745 I 0.800
ENSAMEG00000000186 Ailuropoda melanoleuca ENSAMEG00000000186 I 0.800
ENSMODG00000004531 Monodelphis domestica ENSMODG00000004531 I 0.800
ENSMMUG00000010425 Macaca mulatta ENSMMUG00000010425 I 0.800
ENSLOCG00000012823 Lepisosteus oculatus ENSLOCG00000012823 I 0.800
ENSLAFG00000014271 Loxodonta africana ENSLAFG00000014271 I 0.800
ENSMGAG00000009953 Meleagris gallopavo ENSMGAG00000009953 D 0.800
ENSMICG00000007572 Microcebus murinus ENSMICG00000007572 I 0.800
ENSMLUG00000000494 Myotis lucifugus ENSMLUG00000000494 I 0.800
ENSORLG00000000044 Oryzias latipes ENSORLG00000000044 D 0.800