cassava12533.valid.m1 (Manihot esculenta)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 cassava12533.valid.m1 T322182_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava12533.valid.m1 SAND 26 110

Links

Other SAND family TFs
Other Manihot esculenta TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_007971 Theobroma cacao TCM_007971 N 0.991
PRUPE_ppa017439mg Prunus persica PRUPE_ppa017439mg N 0.991
MDP0000237588 Malus domestica MDP0000237588 N 0.990
MDP0000315130 Malus domestica MDP0000315130 N 0.990
Pm015354 Prunus mume Pm015354 N 0.990
VIT_12s0059g01980 Vitis vinifera VIT_12s0059g01980 N 0.988
SapurV1A.0492s0170 Salix purpurea SapurV1A.0492s0170 N 0.987
POPTR_0019s13550 Populus trichocarpa POPTR_0019s13550 N 0.982
Gorai.008G152400 Gossypium raimondii Gorai.008G152400 N 0.982
SapurV1A.0048s0510 Salix purpurea SapurV1A.0048s0510 N 0.982
SapurV1A.2807s0020 Salix purpurea SapurV1A.2807s0020 N 0.979
Ca_19014 Cicer arietinum Ca_19014 N 0.978
POPTR_0013s14170 Populus trichocarpa POPTR_0013s14170 N 0.977
gene10278-v1.0-hybrid Fragaria vesca gene10278-v1.0-hybrid N 0.975
cassava18740.valid.m1 Manihot esculenta cassava18740.valid.m1 N 0.973
Gorai.005G204800 Gossypium raimondii Gorai.005G204800 N 0.960
evm.TU.supercontig_34.111 Carica papaya evm.TU.supercontig_34.111 N 0.960
Lus10018560.g Linum usitatissimum Lus10018560.g N 0.956
Lus10039791.g Linum usitatissimum Lus10039791.g N 0.954
GLYMA12G11800 Glycine max GLYMA12G11800 N 0.954
GLYMA06G45180 Glycine max GLYMA06G45180 N 0.952
MDP0000089136 Malus domestica MDP0000089136 N 0.950
Bostr.7867s0654 Boechera stricta Bostr.7867s0654 N 0.948
29983.m003255 Ricinus communis 29983.m003255 N 0.945
Cagra.1225s0078 Capsella grandiflora Cagra.1225s0078 N 0.944
AMTR_s00003p00264810 Amborella trichopoda AMTR_s00003p00264810 N 0.943
Bo7g111950 Brassica oleracea Bo7g111950 N 0.938
Carubv10005638m.g Capsella rubella Carubv10005638m.g N 0.935
Cucsa.147930 Cucumis sativus Cucsa.147930 N 0.918
Cla007849 Citrullus lanatus Cla007849 N 0.918
ULT1 Arabidopsis lyrata fgenesh2_kg.7__1389__AT4G28190.1 N 0.914
Eucgr.K00939 Eucalyptus grandis Eucgr.K00939 N 0.913
Bo1g051270 Brassica oleracea Bo1g051270 N 0.907
Aquca_008_00040 Aquilegia coerulea Aquca_008_00040 N 0.894
Bra026276 Brassica rapa Bra026276 N 0.892
GSMUA_Achr2G02900_001 Musa acuminata GSMUA_Achr2G02900_001 N 0.891
GSMUA_AchrUn_randomG13850_001 Musa acuminata GSMUA_AchrUn_randomG13850_001 N 0.891
MTR_0072s0040 Medicago truncatula MTR_0072s0040 N 0.871
PK16281.1 Cannabis sativa PK16281.1 N 0.869