Gorai.005G204800 (Gossypium raimondii)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 Gorai.005G204800 T322253_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.005G204800.1 SAND 27 117
Gorai.005G204800.2 SAND 27 117
Gorai.005G204800.3 SAND 27 116

Links

Other SAND family TFs
Other Gossypium raimondii TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10018560.g Linum usitatissimum Lus10018560.g N 0.986
Lus10039791.g Linum usitatissimum Lus10039791.g N 0.985
29983.m003255 Ricinus communis 29983.m003255 N 0.985
SapurV1A.0492s0170 Salix purpurea SapurV1A.0492s0170 N 0.983
MDP0000089136 Malus domestica MDP0000089136 N 0.981
Eucgr.K00939 Eucalyptus grandis Eucgr.K00939 N 0.971
Cla007849 Citrullus lanatus Cla007849 N 0.967
Cucsa.147930 Cucumis sativus Cucsa.147930 N 0.967
GSMUA_Achr2G02900_001 Musa acuminata GSMUA_Achr2G02900_001 N 0.967
PK16281.1 Cannabis sativa PK16281.1 N 0.963
GSMUA_AchrUn_randomG13850_001 Musa acuminata GSMUA_AchrUn_randomG13850_001 N 0.962
TCM_007971 Theobroma cacao TCM_007971 N 0.961
Aquca_008_00040 Aquilegia coerulea Aquca_008_00040 N 0.961
cassava12533.valid.m1 Manihot esculenta cassava12533.valid.m1 N 0.960
Pm015354 Prunus mume Pm015354 N 0.956
PRUPE_ppa017439mg Prunus persica PRUPE_ppa017439mg N 0.956
MDP0000315130 Malus domestica MDP0000315130 N 0.954
MDP0000237588 Malus domestica MDP0000237588 N 0.954
GSMUA_Achr1G08820_001 Musa acuminata GSMUA_Achr1G08820_001 N 0.951
Gorai.008G152400 Gossypium raimondii Gorai.008G152400 N 0.949
Sb03g036430 Sorghum bicolor Sb03g036430 N 0.948
GRMZM2G082745 Zea mays GRMZM2G082745 N 0.947
GRMZM2G004690 Zea mays GRMZM2G004690 N 0.942
OBART01G33150 Oryza barthii OBART01G33150 N 0.939
OB01G42000 Oryza brachyantha OB01G42000 N 0.939
LPERR01G28620 Leersia perrieri LPERR01G28620 N 0.939
OGLUM01G37340 Oryza glumaepatula OGLUM01G37340 N 0.939
OLONG_014986 Oryza longistaminata OLONG_014986 N 0.939
ORUFI01G36290 Oryza rufipogon ORUFI01G36290 N 0.939
OS01G0780800 Oryza sativa OS01G0780800 N 0.939
ORGLA01G0271200 Oryza glaberrima ORGLA01G0271200 N 0.939
ONIVA01G37460 Oryza nivara ONIVA01G37460 N 0.939
OMERI01G30050 Oryza meridionalis OMERI01G30050 N 0.939
BGIOSGA000702 Oryza indica BGIOSGA000702 N 0.939
VIT_12s0059g01980 Vitis vinifera VIT_12s0059g01980 N 0.932
POPTR_0019s13550 Populus trichocarpa POPTR_0019s13550 N 0.929
SapurV1A.0048s0510 Salix purpurea SapurV1A.0048s0510 N 0.928
POPTR_0013s14170 Populus trichocarpa POPTR_0013s14170 N 0.928
gene10278-v1.0-hybrid Fragaria vesca gene10278-v1.0-hybrid N 0.914
SapurV1A.2807s0020 Salix purpurea SapurV1A.2807s0020 N 0.914
Si002762m.g Setaria italica Si002762m.g N 0.903
Pavir.Eb03405 Panicum virgatum Pavir.Eb03405 N 0.903
Ca_19014 Cicer arietinum Ca_19014 N 0.896
Aquca_102_00032 Aquilegia coerulea Aquca_102_00032 N 0.890
evm.TU.supercontig_34.111 Carica papaya evm.TU.supercontig_34.111 N 0.861