Bra032822 (Brassica rapa)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 Bra032822 T322477_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL10
M01084_2.00
Arabidopsis thaliana
NNGTACGRHN

NDYCGTACNN
PBM
Sullivan et al.(2014)
pTH9749
0.959 0.893
SPL11
M02471_2.00
Arabidopsis thaliana
NNNHGTACGGWN

NWCCGTACDNNN
PBM
Weirauch et al.(2014)
pTH9392
0.906 0.867
SPL11
M07254_2.00
Arabidopsis thaliana
HTGTACTDDHH

DDHHAGTACAD
Dap-seq
OMalley et al.(2016)
SPL11_col100_a
0.906 0.867
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra032822.1-P SBP 164 238

Links

Other SBP family TFs
Other Brassica rapa TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CG8281 Drosophila melanogaster FBgn0035824 D 0.000
GA20952 Drosophila pseudoobscura FBgn0080941 I 0.000
GF23799 Drosophila ananassae FBgn0100793 I 0.000
GG14454 Drosophila erecta FBgn0106713 I 0.000
GH14980 Drosophila grimshawi FBgn0122455 I 0.000
GI13142 Drosophila mojavensis FBgn0135899 I 0.000
GJ13890 Drosophila virilis FBgn0201109 I 0.000
GK18054 Drosophila willistoni FBgn0220053 I 0.000
GM25005 Drosophila sechellia FBgn0179866 I 0.000
LCUP013401 Lucilia cuprina LCUP013401 I 0.000
MDOA002028 Musca domestica MDOA002028 I 0.000