Gorai.005G166500 (Gossypium raimondii)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Gorai.005G166500 T323506_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.005G166500.1 SBP 183 257
Gorai.005G166500.2 SBP 183 257

Links

Other SBP family TFs
Other Gossypium raimondii TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_008772 Theobroma cacao TCM_008772 N 0.953
MDP0000249364 Malus domestica MDP0000249364 N 0.951
LjSGA_032871.1 Lotus japonicus LjSGA_032871.1 N 0.946
Gorai.002G182700 Gossypium raimondii Gorai.002G182700 N 0.945
cassava6540.valid.m1 Manihot esculenta cassava6540.valid.m1 N 0.944
cassava12059.valid.m1 Manihot esculenta cassava12059.valid.m1 N 0.942
PK16953.1 Cannabis sativa PK16953.1 N 0.938
VIT_01s0010g03710 Vitis vinifera VIT_01s0010g03710 I 0.937
SapurV1A.1271s0060 Salix purpurea SapurV1A.1271s0060 I 0.934
POPTR_0001s13890 Populus trichocarpa POPTR_0001s13890 I 0.934
SapurV1A.0056s0240 Salix purpurea SapurV1A.0056s0240 I 0.934
POPTR_0003s17120 Populus trichocarpa POPTR_0003s17120 I 0.934
PRUPE_ppa005013mg Prunus persica PRUPE_ppa005013mg N 0.932
Pm007020 Prunus mume Pm007020 N 0.930
MDP0000155354 Malus domestica MDP0000155354 N 0.930
evm.TU.supercontig_43.66 Carica papaya evm.TU.supercontig_43.66 I 0.930
GSMUA_Achr3G05360_001 Musa acuminata GSMUA_Achr3G05360_001 N 0.929
GSMUA_Achr10G02970_001 Musa acuminata GSMUA_Achr10G02970_001 N 0.929
orange1.1g011640m.g Citrus sinensis orange1.1g011640m.g N 0.928
GSMUA_Achr9G14160_001 Musa acuminata GSMUA_Achr9G14160_001 N 0.928
Ciclev10031391m.g Citrus clementina Ciclev10031391m.g N 0.928
PDK_20s1305791g002 Phoenix dactylifera PDK_20s1305791g002 N 0.927
Ca_11356 Cicer arietinum Ca_11356 I 0.924
GSMUA_Achr5G22630_001 Musa acuminata GSMUA_Achr5G22630_001 N 0.920
MTR_3g085180 Medicago truncatula MTR_3g085180 N 0.919
PGSC0003DMG400034310 Solanum tuberosum PGSC0003DMG400034310 N 0.918
29929.m004641 Ricinus communis 29929.m004641 I 0.917
LjSGA_017270.1 Lotus japonicus LjSGA_017270.1 N 0.916
Bo7g065290 Brassica oleracea Bo7g065290 N 0.912
Aquca_018_00218 Aquilegia coerulea Aquca_018_00218 I 0.910
Bra033671 Brassica rapa Bra033671 N 0.908
Bo9g058970 Brassica oleracea Bo9g058970 N 0.908
Thhalv10003215m.g Eutrema salsugineum Thhalv10003215m.g N 0.908
SPL2 Arabidopsis lyrata scaffold_800740.1 N 0.908
SPL2 Arabidopsis thaliana AT5G43270 N 0.908
Bra027478 Brassica rapa Bra027478 N 0.908
GSMUA_Achr5G21990_001 Musa acuminata GSMUA_Achr5G21990_001 N 0.907
Eucgr.B03500 Eucalyptus grandis Eucgr.B03500 I 0.907
Carubv10026434m.g Capsella rubella Carubv10026434m.g N 0.905
Cagra.8694s0002 Capsella grandiflora Cagra.8694s0002 N 0.905
PGSC0003DMG400026736 Solanum tuberosum PGSC0003DMG400026736 I 0.902
Lus10006411.g Linum usitatissimum Lus10006411.g I 0.901
GSMUA_Achr8G23820_001 Musa acuminata GSMUA_Achr8G23820_001 N 0.900
Sb04g004940 Sorghum bicolor Sb04g004940 N 0.899
GRMZM2G126827 Zea mays GRMZM2G126827 N 0.899
GRMZM2G156621 Zea mays GRMZM2G156621 N 0.899
mgf010397m Mimulus guttatus mgf010397m N 0.898
GLYMA11G36980 Glycine max GLYMA11G36980 N 0.896
GSMUA_Achr6G36010_001 Musa acuminata GSMUA_Achr6G36010_001 N 0.896
BRADI3G05510 Brachypodium distachyon BRADI3G05510 I 0.895
Lus10021614.g Linum usitatissimum Lus10021614.g N 0.893
Bostr.3148s0148 Boechera stricta Bostr.3148s0148 N 0.893
GRMZM2G163813 Zea mays GRMZM2G163813 N 0.892
mgf019346m Mimulus guttatus mgf019346m I 0.890