GSMUA_Achr11G17050_001 (Musa acuminata)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 GSMUA_Achr11G17050_001 T323858_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr11P17050_001 Sigma 70 344 414

Links

Other Sigma 70 family TFs
Other Musa acuminata TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr4G30300_001 Musa acuminata GSMUA_Achr4G30300_001 N 0.865
PDK_20s1626471g002 Phoenix dactylifera PDK_20s1626471g002 N 0.859
AMTR_s00009p00072720 Amborella trichopoda AMTR_s00009p00072720 N 0.803
PGSC0003DMG400021553 Solanum tuberosum PGSC0003DMG400021553 N 0.775
Solyc09g008040.2 Solanum lycopersicum Solyc09g008040.2 N 0.775
Cagra.0558s0014 Capsella grandiflora Cagra.0558s0014 N 0.761
Bo4g186560 Brassica oleracea Bo4g186560 N 0.761
SIGF Arabidopsis lyrata fgenesh2_kg.4__1742__AT2G36990.1 N 0.761
Carubv10022939m.g Capsella rubella Carubv10022939m.g N 0.761
Bostr.23794s0392 Boechera stricta Bostr.23794s0392 N 0.761
Thhalv10016472m.g Eutrema salsugineum Thhalv10016472m.g N 0.761
SIGF Arabidopsis thaliana AT2G36990 N 0.761
Aquca_030_00101 Aquilegia coerulea Aquca_030_00101 N 0.750
Si034994m.g Setaria italica Si034994m.g N 0.746
Sb01g000390 Sorghum bicolor Sb01g000390 N 0.746
mgf007606m Mimulus guttatus mgf007606m N 0.746
Pavir.Ib04452 Panicum virgatum Pavir.Ib04452 N 0.746
BGIOSGA028267 Oryza indica BGIOSGA028267 N 0.746
Cla018594 Citrullus lanatus Cla018594 N 0.746
OS08G0242800 Oryza sativa OS08G0242800 N 0.746
OLONG_007958 Oryza longistaminata OLONG_007958 N 0.746
OBART08G07320 Oryza barthii OBART08G07320 N 0.746
OB08G17050 Oryza brachyantha OB08G17050 N 0.746
GRMZM2G144196 Zea mays GRMZM2G144196 N 0.746
Bra017213 Brassica rapa Bra017213 N 0.746
OMERI03G18460 Oryza meridionalis OMERI03G18460 N 0.746
OGLUM08G08160 Oryza glumaepatula OGLUM08G08160 N 0.746
ORGLA08G0064000 Oryza glaberrima ORGLA08G0064000 N 0.746
ONIVA08G08070 Oryza nivara ONIVA08G08070 N 0.746
ORUFI08G08440 Oryza rufipogon ORUFI08G08440 N 0.746
OPUNC08G07030 Oryza punctata OPUNC08G07030 N 0.746
evm.TU.supercontig_56.16 Carica papaya evm.TU.supercontig_56.16 N 0.732
Pavir.Ha01929 Panicum virgatum Pavir.Ha01929 N 0.732
PRUPE_ppa003513mg Prunus persica PRUPE_ppa003513mg N 0.732
LPERR08G06520 Leersia perrieri LPERR08G06520 N 0.732
Pm030137 Prunus mume Pm030137 N 0.732
gene09615-v1.0-hybrid Fragaria vesca gene09615-v1.0-hybrid N 0.732
Eucgr.K01255 Eucalyptus grandis Eucgr.K01255 N 0.732
SIGF Vitis vinifera VIT_08s0040g01560 N 0.732
Aquca_053_00136 Aquilegia coerulea Aquca_053_00136 N 0.732
SapurV1A.0141s0230 Salix purpurea SapurV1A.0141s0230 N 0.718
30078.m002307 Ricinus communis 30078.m002307 N 0.718
Ciclev10011376m.g Citrus clementina Ciclev10011376m.g N 0.718
Pavir.Ia00050 Panicum virgatum Pavir.Ia00050 N 0.718
orange1.1g008352m.g Citrus sinensis orange1.1g008352m.g N 0.718
POPTR_0006s12760 Populus trichocarpa POPTR_0006s12760 N 0.704
chr1.CM0033.1120.nc Lotus japonicus chr1.CM0033.1120.nc N 0.704
Gorai.009G415400 Gossypium raimondii Gorai.009G415400 N 0.704
Cucsa.124610 Cucumis sativus Cucsa.124610 N 0.704