GSMUA_Achr4G01060_001 (Musa acuminata)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 GSMUA_Achr4G01060_001 T323860_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr4P01060_001 Sigma 70 336 406

Links

Other Sigma 70 family TFs
Other Musa acuminata TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PDK_20s1533271g001 Phoenix dactylifera PDK_20s1533271g001 N 0.775
orange1.1g009449m.g Citrus sinensis orange1.1g009449m.g N 0.746
Ciclev10007968m.g Citrus clementina Ciclev10007968m.g N 0.746
GLYMA17G26620 Glycine max GLYMA17G26620 N 0.746
SapurV1A.0890s0100 Salix purpurea SapurV1A.0890s0100 N 0.732
SIGC Arabidopsis lyrata Al_scaffold_0005_2291 N 0.718
Bostr.11793s0002 Boechera stricta Bostr.11793s0002 N 0.718
AMTR_s00056p00209700 Amborella trichopoda AMTR_s00056p00209700 N 0.718
SIGC Arabidopsis thaliana AT3G53920 N 0.718
Cagra.2252s0020 Capsella grandiflora Cagra.2252s0020 N 0.704
Carubv10016920m.g Capsella rubella Carubv10016920m.g N 0.704
Ca_14896 Cicer arietinum Ca_14896 N 0.704
Bo4g120510 Brassica oleracea Bo4g120510 N 0.704
GLYMA14G22170 Glycine max GLYMA14G22170 N 0.704
MTR_1g007370 Medicago truncatula MTR_1g007370 N 0.704
SIGC Vitis vinifera VIT_04s0008g00600 N 0.704
cassava18263.valid.m1 Manihot esculenta cassava18263.valid.m1 N 0.704