Gorai.004G253700 (Gossypium raimondii)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 Gorai.004G253700 T324193_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G253700.1 Sigma 70 337 407
Gorai.004G253700.2 Sigma 70 337 407
Gorai.004G253700.3 Sigma 70 337 407

Links

Other Sigma 70 family TFs
Other Gossypium raimondii TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr7G04860_001 Musa acuminata GSMUA_Achr7G04860_001 N 0.915
Gorai.007G347300 Gossypium raimondii Gorai.007G347300 N 0.915
cassava14033.valid.m1 Manihot esculenta cassava14033.valid.m1 N 0.915
Cucsa.362600 Cucumis sativus Cucsa.362600 N 0.915
TCM_025741 Theobroma cacao TCM_025741 N 0.901
evm.TU.supercontig_73.29 Carica papaya evm.TU.supercontig_73.29 N 0.901
SIGB Vitis vinifera VIT_15s0024g00640 N 0.901
Cla007091 Citrullus lanatus Cla007091 N 0.901
PK16345.1 Cannabis sativa PK16345.1 N 0.901
30148.m001412 Ricinus communis 30148.m001412 N 0.901
chr1.CM0017.250.nc Lotus japonicus chr1.CM0017.250.nc N 0.901
gene17946-v1.0-hybrid Fragaria vesca gene17946-v1.0-hybrid N 0.901
mgf015824m Mimulus guttatus mgf015824m N 0.887
PRUPE_ppa006657mg Prunus persica PRUPE_ppa006657mg N 0.887
Eucgr.D01094 Eucalyptus grandis Eucgr.D01094 N 0.887
Ciclev10030998m.g Citrus clementina Ciclev10030998m.g N 0.887
Pm025497 Prunus mume Pm025497 N 0.887
POPTR_0013s06770 Populus trichocarpa POPTR_0013s06770 N 0.887
SapurV1A.1953s0020 Salix purpurea SapurV1A.1953s0020 N 0.887
GLYMA04G00330 Glycine max GLYMA04G00330 N 0.887
orange1.1g007404m.g Citrus sinensis orange1.1g007404m.g N 0.887
MDP0000157652 Malus domestica MDP0000157652 N 0.887
Bra018617 Brassica rapa Bra018617 N 0.873
Bo5g009070 Brassica oleracea Bo5g009070 N 0.873
Aquca_013_00876 Aquilegia coerulea Aquca_013_00876 N 0.873
Bostr.25219s0090 Boechera stricta Bostr.25219s0090 N 0.873
Bra030732 Brassica rapa Bra030732 N 0.873
SIGB Arabidopsis thaliana AT1G08540 N 0.873
AMTR_s00011p00258380 Amborella trichopoda AMTR_s00011p00258380 N 0.873
SapurV1A.1189s0050 Salix purpurea SapurV1A.1189s0050 N 0.873
Solyc01g081490.2 Solanum lycopersicum Solyc01g081490.2 N 0.873
Carubv10008711m.g Capsella rubella Carubv10008711m.g N 0.873
Thhalv10007187m.g Eutrema salsugineum Thhalv10007187m.g N 0.873
Cagra.4395s0044 Capsella grandiflora Cagra.4395s0044 N 0.873
SIGB Arabidopsis lyrata fgenesh2_kg.1__869__AT1G08540.1 N 0.873
Ca_04693 Cicer arietinum Ca_04693 N 0.859
PGSC0003DMG400031111 Solanum tuberosum PGSC0003DMG400031111 N 0.859
MTR_3g118290 Medicago truncatula MTR_3g118290 N 0.859
GSMUA_Achr7G17330_001 Musa acuminata GSMUA_Achr7G17330_001 N 0.859
POPTR_0019s06100 Populus trichocarpa POPTR_0019s06100 N 0.859
Lus10005668.g Linum usitatissimum Lus10005668.g N 0.803
Lus10020325.g Linum usitatissimum Lus10020325.g N 0.803
Lus10001339.g Linum usitatissimum Lus10001339.g N 0.718
Lus10013642.g Linum usitatissimum Lus10013642.g N 0.718
Sb01g039810 Sorghum bicolor Sb01g039810 N 0.704
GRMZM2G100086 Zea mays GRMZM2G100086 N 0.700
GRMZM2G003182 Zea mays GRMZM2G003182 N 0.700
F775_32094 Aegilops tauschii F775_32094 N 0.700
BRADI1G66830 Brachypodium distachyon BRADI1G66830 N 0.700
GRMZM2G164084 Zea mays GRMZM2G164084 N 0.700
Pavir.Ia03759 Panicum virgatum Pavir.Ia03759 N 0.700
Traes_4DL_B8D22E4C2 Triticum aestivum Traes_4DL_B8D22E4C2 N 0.700
Si035112m.g Setaria italica Si035112m.g N 0.700
MLOC_59299 Hordeum vulgare MLOC_59299 N 0.700
Traes_4AS_DE644E0CF Triticum aestivum Traes_4AS_DE644E0CF N 0.700