CRE02943 (Caenorhabditis remanei)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 CRE02943 T327223_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
CRE02943 Sox 49 115
CRE02943 Sox 137 205

Links

Other Sox family TFs
Other Caenorhabditis remanei TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
hmg-1.2 Caenorhabditis elegans WBGene00001972 N 0.732
CJA09678 Caenorhabditis japonica CJA09678 N 0.692
CBG17468 Caenorhabditis briggsae CBG17468 N 0.690
CBN17977 Caenorhabditis brenneri CBN17977 N 0.685
CJA42049 Caenorhabditis japonica CJA42049 N 0.661
ACOC_0000768601 Angiostrongylus costaricensis ACOC_0000768601 N 0.652
Hba_13817 Heterorhabditis bacteriophora Hba_13817 N 0.652
NBR_0000911001 Nippostrongylus brasiliensis NBR_0000911001 N 0.652
nRc.2.0.1.g43473 Romanomermis culicivorax nRc.2.0.1.g43473 N 0.652
HCOI00860100 Haemonchus contortus HCOI00860100 N 0.652
NECAME_09126 Necator americanus NECAME_09126 N 0.652
TELCIR_07111 Teladorsagia circumcincta TELCIR_07111 N 0.652
SMUV_0000232601 Syphacia muris SMUV_0000232601 N 0.636
ASU_03902 Ascaris suum ASU_03902 N 0.633
EEL_0000068601 Elaeophora elaphi EEL_0000068601 N 0.633
WBGene00245261 Onchocerca volvulus WBGene00245261 N 0.633
EVEC_0000577301 Enterobius vermicularis EVEC_0000577301 N 0.633
nAv.1.0.1.g02101 Acanthocheilonema viteae nAv.1.0.1.g02101 N 0.633
Bm4180 Brugia malayi Bm4180 N 0.633
TCLT_0000879501 Thelazia callipaeda TCLT_0000879501 N 0.633
LOAG_04936 Loa loa LOAG_04936 N 0.633
TCNE_0000567001 Toxocara canis TCNE_0000567001 N 0.633
nDi.2.2.2.g04979 Dirofilaria immitis nDi.2.2.2.g04979 N 0.633
PEQ_0000150901 Parascaris equorum PEQ_0000150901 N 0.633
L892_g17551 Steinernema scapterisci L892_g17551 N 0.630
L893_g5947 Steinernema glaseri L893_g5947 N 0.630
L596_g22130 Steinernema carpocapsae L596_g22130 N 0.630
L889_g13533 Steinernema feltiae L889_g13533 N 0.625
DME_0001055201 Dracunculus medinensis DME_0001055201 N 0.617
TTRE_0000338301 Trichuris trichiura TTRE_0000338301 N 0.613
TMUE_s0235000800 Trichuris muris TMUE_s0235000800 N 0.613
D918_07195 Trichuris suis D918_07195 N 0.613
SSTP_0000371800 Strongyloides stercoralis SSTP_0000371800 N 0.610
SVE_0494300 Strongyloides venezuelensis SVE_0494300 N 0.610
PTRK_0000986200 Parastrongyloides trichosuri PTRK_0000986200 N 0.610
SPAL_0001030300 Strongyloides papillosus SPAL_0001030300 N 0.610
Ppa-hmg-1.2 Pristionchus pacificus PPA02361 N 0.608
scaffold580-EXSNAP2012.5 Pristionchus exspectatus scaffold580-EXSNAP2012.5 N 0.608
D917_08189 Trichinella nativa D917_08189 N 0.604
SBAD_0000405201 Soboliphyme baturini SBAD_0000405201 N 0.600
ANCCAN_10156 Ancylostoma caninum ANCCAN_10156 N 0.600
ASIM_0000048401 Anisakis simplex ASIM_0000048401 N 0.598
D917_01254 Trichinella nativa D917_01254 N 0.583
EFV57410 Trichinella spiralis EFV57410 N 0.583
WUBG_12099 Wuchereria bancrofti WUBG_12099 N 0.581
ACAC_0001052301 Angiostrongylus cantonensis ACAC_0001052301 N 0.575
BXY_1555400 Bursaphelenchus xylophilus BXY_1555400 N 0.572
RSKR_0000605700 Rhabditophanes kr3021 RSKR_0000605700 N 0.568
EFV53345 Trichinella spiralis EFV53345 N 0.565
ANCCEY_10333 Ancylostoma ceylanicum ANCCEY_10333 N 0.565
genemark-nMf.1.1.scaf06964-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf06964-processed-gene-0.3 N 0.564
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 N 0.564
nLs.2.1.2.g00300 Litomosoides sigmodontis nLs.2.1.2.g00300 N 0.538
GPUH_0001544201 Gongylonema pulchrum GPUH_0001544201 N 0.522
TELCIR_06008 Teladorsagia circumcincta TELCIR_06008 N 0.519
Minc08988 Meloidogyne incognita Minc08988 N 0.508
Minc03268 Meloidogyne incognita Minc03268 N 0.508
MhA1_Contig113.frz3.gene9 Meloidogyne hapla MhA1_Contig113.frz3.gene9 N 0.508
fgenesh2_pm.scaffold_24000033 Branchiostoma floridae fgenesh2_pm.scaffold_24000033 N 0.488
Minc01077 Meloidogyne incognita Minc01077 N 0.454
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.451
TsM_000115400 Taenia solium TsM_000115400 N 0.451
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.451
tetur02g08260 Tetranychus urticae tetur02g08260 N 0.444
tetur02g08340 Tetranychus urticae tetur02g08340 N 0.441
HelroG157878 Helobdella robusta HelroG157878 N 0.440
ISCW017350 Ixodes scapularis ISCW017350 N 0.440
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N 0.440
T265_12733 Opisthorchis viverrini T265_12733 N 0.435
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.434
D915_00818 Fasciola hepatica D915_00818 N 0.434
CapteG158220 Capitella teleta CapteG158220 N 0.432
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N 0.432
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.431
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.431
PXEA_0000566701 Protopolystoma xenopodis PXEA_0000566701 N 0.430
NV15664 Nasonia vitripennis NV15664 N 0.428
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N 0.426
DAPPUDRAFT_232871 Daphnia pulex DAPPUDRAFT_232871 N 0.426
HmN_000466000 Hymenolepis microstoma HmN_000466000 N 0.422
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N 0.422
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N 0.422
SMU15016767 Schmidtea mediterranea SMU15016767 N 0.421
CGI_10023724 Crassostrea gigas CGI_10023724 N 0.420
SMAR013695 Strigamia maritima SMAR013695 N 0.418
AEPI002924 Anopheles epiroticus AEPI002924 N 0.417
Cflo_05895--XP_001121384.1_APIME Camponotus floridanus Cflo_05895--XP_001121384.1_APIME N 0.415
Hsal_13110--XP_001121384.1_APIME Harpegnathos saltator Hsal_13110--XP_001121384.1_APIME N 0.415