CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HelroG187893
(
Helobdella robusta
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
HelroG187893
T330548_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HelroP187893
Sox
194
237
PKKPLNTYMMFSKAIWPQVKAANSHLSSVTEIGAIVGAIWRELD
Links
Other
Sox
family TFs
Other
Helobdella robusta
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CapteG111479
Capitella teleta
CapteG111479
N
0.485
estExt_fgenesh1_pg.C_770024
Bigelowiella natans
estExt_fgenesh1_pg.C_770024
N
0.470
AFUN008225
Anopheles funestus
AFUN008225
N
0.461
AFUN011920
Anopheles funestus
AFUN011920
N
0.461
AFUN008244
Anopheles funestus
AFUN008244
N
0.461
GLOINDRAFT_349538
Rhizophagus irregularis
GLOINDRAFT_349538
N
0.455
GUITHDRAFT_163519
Guillardia theta
GUITHDRAFT_163519
I
0.443
AMIN001923
Anopheles minimus
AMIN001923
N
0.442
MDP0000392251
Malus domestica
MDP0000392251
N
0.440
TCM_029514
Theobroma cacao
TCM_029514
N
0.440
GLYMA01G28820
Glycine max
GLYMA01G28820
I
0.436
MTR_8g018100
Medicago truncatula
MTR_8g018100
N
0.436
GLYMA03G08270
Glycine max
GLYMA03G08270
I
0.436
mgf012563m
Mimulus guttatus
mgf012563m
I
0.433
HelroG178410
Helobdella robusta
HelroG178410
N
0.433
GRMZM2G024247
Zea mays
GRMZM2G024247
N
0.433
MYCTH_2308522
Myceliophthora thermophila
MYCTH_2308522
I
0.432
GRMZM5G834758
Zea mays
GRMZM5G834758
I
0.430
BRADI1G29730
Brachypodium distachyon
BRADI1G29730
I
0.430
Si007288m.g
Setaria italica
Si007288m.g
I
0.430