OSTLU_15490 (Ostreococcus lucimarinus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 OSTLU_15490 T331719_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ABO96329 Sox 73 119

Links

Other Sox family TFs
Other Ostreococcus lucimarinus TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh1_pg.chr_5_#_192 Ostreococcus RCC809 fgenesh1_pg.chr_5_#_192 N 0.563
EuGene.0300010215 Micromonas sp RCC299 EuGene.0300010215 I 0.536
est_cluster_kg.Chr_05__92__3202834:1 Micromonas sp RCC299 est_cluster_kg.Chr_05__92__3202834:1 I 0.536
EuGene.0000030607 Micromonas pusilla EuGene.0000030607 N 0.513
EMIHUDRAFT_114782 Emiliania huxleyi EMIHUDRAFT_114782 I 0.443
EMIHUDRAFT_98817 Emiliania huxleyi EMIHUDRAFT_98817 I 0.443
BATDEDRAFT_7789 Batrachochytrium dendrobatidis BATDEDRAFT_7789 I 0.436
nRc.2.0.1.g48254 Romanomermis culicivorax nRc.2.0.1.g48254 N 0.432
EMIHUDRAFT_117867 Emiliania huxleyi EMIHUDRAFT_117867 I 0.432
SapurV1A.0248s0170 Salix purpurea SapurV1A.0248s0170 I 0.424
Cucsa.320600 Cucumis sativus Cucsa.320600 I 0.420
mgf011463m Mimulus guttatus mgf011463m I 0.420
mgf015806m Mimulus guttatus mgf015806m I 0.420
Cucsa.302100 Cucumis sativus Cucsa.302100 I 0.420
mgf003166m Mimulus guttatus mgf003166m I 0.420
30174.m008839 Ricinus communis 30174.m008839 I 0.420
Pm017846 Prunus mume Pm017846 I 0.420
Cla011745 Citrullus lanatus Cla011745 I 0.420
Ca_25981 Cicer arietinum Ca_25981 I 0.420
Pm023555 Prunus mume Pm023555 I 0.420
28200.m000191 Ricinus communis 28200.m000191 I 0.420
cassava30083.valid.m1 Manihot esculenta cassava30083.valid.m1 I 0.420
cassava13963.valid.m1 Manihot esculenta cassava13963.valid.m1 I 0.420
Ciclev10021834m.g Citrus clementina Ciclev10021834m.g I 0.420
cassava43469.valid.m1 Manihot esculenta cassava43469.valid.m1 I 0.420
evm.TU.supercontig_145.3 Carica papaya evm.TU.supercontig_145.3 I 0.420
SapurV1A.0033s0530 Salix purpurea SapurV1A.0033s0530 I 0.420
Pavir.Ib03707 Panicum virgatum Pavir.Ib03707 I 0.420
orange1.1g028144m.g Citrus sinensis orange1.1g028144m.g I 0.420
SapurV1A.0217s0100 Salix purpurea SapurV1A.0217s0100 I 0.420
SapurV1A.0634s0130 Salix purpurea SapurV1A.0634s0130 I 0.420
LjSGA_107961.1 Lotus japonicus LjSGA_107961.1 I 0.420
SapurV1A.2672s0010 Salix purpurea SapurV1A.2672s0010 I 0.420
SapurV1A.1275s0050 Salix purpurea SapurV1A.1275s0050 I 0.420
orange1.1g027215m.g Citrus sinensis orange1.1g027215m.g I 0.420
MDP0000298333 Malus domestica MDP0000298333 I 0.420
gene32251-v1.0-hybrid Fragaria vesca gene32251-v1.0-hybrid I 0.420
VIT_15s0048g00550 Vitis vinifera VIT_15s0048g00550 I 0.420
Eucgr.E01474 Eucalyptus grandis Eucgr.E01474 I 0.420
Gorai.001G174800 Gossypium raimondii Gorai.001G174800 I 0.420
Lus10010361.g Linum usitatissimum Lus10010361.g I 0.420
MDP0000192940 Malus domestica MDP0000192940 I 0.420
Lus10036496.g Linum usitatissimum Lus10036496.g I 0.420
Ciclev10022170m.g Citrus clementina Ciclev10022170m.g I 0.420
TCM_005549 Theobroma cacao TCM_005549 I 0.420
OGLUM02G26190 Oryza glumaepatula OGLUM02G26190 I 0.420
OBART10G15260 Oryza barthii OBART10G15260 I 0.420
OBART02G25670 Oryza barthii OBART02G25670 I 0.420
OGLUM10G15140 Oryza glumaepatula OGLUM10G15140 I 0.420
OLONG_018621 Oryza longistaminata OLONG_018621 I 0.420
ONIVA02G28110 Oryza nivara ONIVA02G28110 I 0.420
OMERI10G11950 Oryza meridionalis OMERI10G11950 I 0.420
OMERI02G25190 Oryza meridionalis OMERI02G25190 I 0.420
OB02G33040 Oryza brachyantha OB02G33040 I 0.420
MTR_4g025900 Medicago truncatula MTR_4g025900 I 0.420
GLYMA03G03500 Glycine max GLYMA03G03500 I 0.420
GLYMA01G33370 Glycine max GLYMA01G33370 I 0.420
BRADI3G30410 Brachypodium distachyon BRADI3G30410 I 0.420
GRMZM2G074543 Zea mays GRMZM2G074543 I 0.420
GRMZM2G167824 Zea mays GRMZM2G167824 I 0.420
MLOC_70653 Hordeum vulgare MLOC_70653 I 0.420
LPERR10G11580 Leersia perrieri LPERR10G11580 I 0.420
LPERR02G20990 Leersia perrieri LPERR02G20990 I 0.420
TRIUR3_27479 Triticum urartu TRIUR3_27479 I 0.420
ONIVA04G21490 Oryza nivara ONIVA04G21490 I 0.420
PRUPE_ppa010905mg Prunus persica PRUPE_ppa010905mg I 0.420
POPTR_0014s06210 Populus trichocarpa POPTR_0014s06210 I 0.420
POPTR_0003s11230 Populus trichocarpa POPTR_0003s11230 I 0.420
PRUPE_ppa011209mg Prunus persica PRUPE_ppa011209mg I 0.420
Sb01g017560 Sorghum bicolor Sb01g017560 I 0.420
Traes_1DL_C5AF9D06A Triticum aestivum Traes_1DL_C5AF9D06A I 0.420
Solyc01g091010.2 Solanum lycopersicum Solyc01g091010.2 I 0.420
Si036788m.g Setaria italica Si036788m.g I 0.420
OPUNC02G23520 Oryza punctata OPUNC02G23520 I 0.420
POPTR_0002s14600 Populus trichocarpa POPTR_0002s14600 I 0.420
ORUFI02G27080 Oryza rufipogon ORUFI02G27080 I 0.420
ORGLA02G0220100 Oryza glaberrima ORGLA02G0220100 I 0.420
OPUNC10G13730 Oryza punctata OPUNC10G13730 I 0.420
POPTR_0001s00240 Populus trichocarpa POPTR_0001s00240 I 0.420
ORUFI10G16240 Oryza rufipogon ORUFI10G16240 I 0.420
PGSC0003DMG400025969 Solanum tuberosum PGSC0003DMG400025969 I 0.420
YAB3 Oryza sativa OS10G0508300 I 0.420
YAB4 Oryza sativa OS02G0643200 I 0.420
GLOINDRAFT_347422 Rhizophagus irregularis GLOINDRAFT_347422 I 0.417