Thaps11168 (Thalassiosira pseudonana)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Thaps11168 T332906_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thaps11168 Sox 296 322
Thaps11168 Sox 372 422

Links

Other Sox family TFs
Other Thalassiosira pseudonana TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh2_kg.C_130080 Fragilariopsis cylindrus estExt_fgenesh2_kg.C_130080 N 0.552
Phatr3_J49938 Phaeodactylum tricornutum Phatr3_J49938 N 0.527
Phatr3_J33840 Phaeodactylum tricornutum Phatr3_J33840 N 0.523
fgenesh2_pg.9_#_353 Fragilariopsis cylindrus fgenesh2_pg.9_#_353 N 0.502
Phatr3_J49937 Phaeodactylum tricornutum Phatr3_J49937 N 0.496
Phatr3_J38097 Phaeodactylum tricornutum Phatr3_J38097 N 0.491
Phatr3_J47350 Phaeodactylum tricornutum Phatr3_J47350 N 0.485
Thaps5285 Thalassiosira pseudonana Thaps5285 N 0.484
Thaps22889 Thalassiosira pseudonana Thaps22889 N 0.482
Phatr3_J50240 Phaeodactylum tricornutum Phatr3_J50240 N 0.479
Phatr3_J50336 Phaeodactylum tricornutum Phatr3_J50336 N 0.479
estExt_Genewise1Plus.C_70298 Fragilariopsis cylindrus estExt_Genewise1Plus.C_70298 N 0.478
S40285_05706 Stachybotrys chlorohalonata S40285_05706 N 0.477
Thaps25909 Thalassiosira pseudonana Thaps25909 N 0.474
Thaps24954 Thalassiosira pseudonana Thaps24954 N 0.468
PAS_chr1-1_0442 Komagataella pastoris PAS_chr1-1_0442 N 0.467
XP_002490100.1 Pichia pastoris XP_002490100.1 N 0.467
fgenesh2_pg.4_#_1036 Fragilariopsis cylindrus fgenesh2_pg.4_#_1036 N 0.464
Thapsdraft651 Thalassiosira pseudonana Thapsdraft651 N 0.463
Thaps10099 Thalassiosira pseudonana Thaps10099 N 0.463
Thaps4076 Thalassiosira pseudonana Thaps4076 N 0.458
Thaps4075 Thalassiosira pseudonana Thaps4075 N 0.458
TGME49_081900 Toxoplasma gondii TGME49_081900 N 0.456
Phatr3_J49506 Phaeodactylum tricornutum Phatr3_J49506 N 0.454
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.449
MAM_05902 Metarhizium album MAM_05902 N 0.441
Thaps12024 Thalassiosira pseudonana Thaps12024 N 0.437
Thaps22372 Thalassiosira pseudonana Thaps22372 N 0.437
GPLIN_000170600 Globodera pallida GPLIN_000170600 N 0.436
Phatr3_J39045 Phaeodactylum tricornutum Phatr3_J39045 N 0.436
GLOINDRAFT_9339 Rhizophagus irregularis GLOINDRAFT_9339 N 0.433
Phatr3_J42576 Phaeodactylum tricornutum Phatr3_J42576 N 0.428
NCLIV_023590 Neospora caninum NCLIV_023590 N 0.424