VDBG_09577 (Verticillium alfalfae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 VDBG_09577 T333217_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EEY23467 Sox 241 272
EEY23467 Sox 355 388

Links

Other Sox family TFs
Other Verticillium alfalfae TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VDBG_09577 Verticillium albo atrum VDBG_09577 N 0.741
GPUH_0001439101 Gongylonema pulchrum GPUH_0001439101 N 0.516
L889_g18776 Steinernema feltiae L889_g18776 N 0.513
GLOINDRAFT_33320 Rhizophagus irregularis GLOINDRAFT_33320 N 0.483
maker-nMf.1.1.scaf05090-augustus-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf05090-augustus-gene-0.8 N 0.471
DAPPUDRAFT_323625 Daphnia pulex DAPPUDRAFT_323625 N 0.462
L893_g33192 Steinernema glaseri L893_g33192 N 0.436
Bostr.29223s0052 Boechera stricta Bostr.29223s0052 N 0.434
PGUG_00551 Meyerozyma guilliermondii PGUG_00551 N 0.421
PGUG_00551 Candida guilliermondii PGUG_00551 N 0.421