MDP0000237182 (Malus domestica)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 MDP0000237182 T334602_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000237182 Sox 192 260

Links

Other Sox family TFs
Other Malus domestica TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa003531mg Prunus persica PRUPE_ppa003531mg N 0.708
Pm014490 Prunus mume Pm014490 N 0.708
PK10571.1 Cannabis sativa PK10571.1 N 0.679
Gorai.010G218300 Gossypium raimondii Gorai.010G218300 N 0.669
TCM_045462 Theobroma cacao TCM_045462 N 0.652
VIT_14s0006g01840 Vitis vinifera VIT_14s0006g01840 N 0.632
evm.TU.supercontig_116.14 Carica papaya evm.TU.supercontig_116.14 N 0.616
28748.m000216 Ricinus communis 28748.m000216 N 0.616
PGSC0003DMG400016690 Solanum tuberosum PGSC0003DMG400016690 N 0.606
orange1.1g043878m.g Citrus sinensis orange1.1g043878m.g N 0.606
Solyc03g043600.1 Solanum lycopersicum Solyc03g043600.1 N 0.606
Ciclev10011294m.g Citrus clementina Ciclev10011294m.g N 0.606
SapurV1A.0728s0020 Salix purpurea SapurV1A.0728s0020 N 0.589
SapurV1A.0230s0030 Salix purpurea SapurV1A.0230s0030 N 0.589
GLYMA10G34561 Glycine max GLYMA10G34561 N 0.573
POPTR_0004s09080 Populus trichocarpa POPTR_0004s09080 N 0.569