CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HHAL007378-PA
(
Halyomorpha halys
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
HHAL007378-PA
T334850_2.00
Misc (2018-Jan-19)
NCBI Gene Info:
This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HHAL007378-PA
Sox
14
82
PEKPLMPYMRYSRKVWDQIKAQNPELKLWEIGKIIGQMWRDLPDEEKTEYVEDYEAEKLEYEKSLKAYH
Links
Other
Sox
family TFs
Other
Halyomorpha halys
TFs
152 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMAR004982
Strigamia maritima
SMAR004982
N
0.722
CLEC009203
Cimex lectularius
CLEC009203
N
0.720
YQE_02381
Dendroctonus ponderosae
YQE_02381
N
0.718
GB50847
Apis mellifera
GB50847
N
0.718
ACEP21543
Atta cephalotes
ACEP21543
N
0.718
Cflo_00654--XP_395543.3_APIME
Camponotus floridanus
Cflo_00654--XP_395543.3_APIME
N
0.718
Hsal_01302--XP_395543.3_APIME
Harpegnathos saltator
Hsal_01302--XP_395543.3_APIME
N
0.718
L798_00593
Zootermopsis nevadensis
L798_00593
N
0.716
NV11999
Nasonia vitripennis
NV11999
N
0.716
TC007745
Tribolium castaneum
TC007745
N
0.716
LDEC003494
Leptinotarsa decemlineata
LDEC003494
N
0.716
ISCW021016
Ixodes scapularis
ISCW021016
N
0.715
HHAL002088-PA
Halyomorpha halys
HHAL002088-PA
N
0.705
PPAI002058
Phlebotomus papatasi
PPAI002058
N
0.704
CpipJ_CPIJ018416
Culex pipiens
CpipJ_CPIJ018416
N
0.703
CpipJ_CPIJ007400
Culex pipiens
CpipJ_CPIJ007400
N
0.703
DAPPUDRAFT_305068
Daphnia pulex
DAPPUDRAFT_305068
N
0.703
CPIJ007400
Culex quinquefasciatus
CPIJ007400
N
0.703
CPIJ018416
Culex quinquefasciatus
CPIJ018416
N
0.703
AAEL010903
Aedes aegypti
AAEL010903
N
0.703
CLEC001104
Cimex lectularius
CLEC001104
N
0.695
SMARCE1
Gasterosteus aculeatus
ENSGACG00000018114
N
0.695
ENSPFOG00000019561
Poecilia formosa
ENSPFOG00000019561
N
0.692
smarce1
Tetraodon nigroviridis
ENSTNIG00000014009
N
0.692
ENSXMAG00000002642
Xiphophorus maculatus
ENSXMAG00000002642
N
0.692
ENSPFOG00000009890
Poecilia formosa
ENSPFOG00000009890
N
0.692
smarce1
Takifugu rubripes
ENSTRUG00000012899
N
0.692
ENSGMOG00000002045
Gadus morhua
ENSGMOG00000002045
N
0.692
smarce1
Oryzias latipes
ENSORLG00000018629
N
0.692
ENSONIG00000006293
Oreochromis niloticus
ENSONIG00000006293
N
0.692
NEMVEDRAFT_v1g177453
Nematostella vectensis
NEMVEDRAFT_v1g177453
N
0.691
AC123471.1
Rattus norvegicus
ENSRNOG00000018377
N
0.689
AAH41216
Xenopus laevis
AAH41216
N
0.689
ACYPI008028
Acyrthosiphon pisum
ACYPI008028
N
0.687
ENSOCUG00000016848
Oryctolagus cuniculus
ENSOCUG00000016848
N
0.682
LLOJ006040
Lutzomyia longipalpis
LLOJ006040
N
0.671
ENSCING00000007774
Ciona intestinalis
ENSCING00000007774
N
0.658
AQUA007127
Anopheles quadriannulatus
AQUA007127
N
0.656
AMIN003302
Anopheles minimus
AMIN003302
N
0.656
ASIS021704
Anopheles sinensis
ASIS021704
N
0.656
ASTEI00336
Anopheles stephensi
ASTEI00336
N
0.656
AARA006951
Anopheles arabiensis
AARA006951
N
0.656
ADAC004863
Anopheles darlingi
ADAC004863
N
0.656
AGAP001994
Anopheles gambiae
AGAP001994
N
0.656
ACUA002517
Anopheles culicifacies
ACUA002517
N
0.656
AFUN008276
Anopheles funestus
AFUN008276
N
0.656
AMAM007470
Anopheles maculatus
AMAM007470
N
0.656
AMEC010472
Anopheles melas
AMEC010472
N
0.656
AMEM015770
Anopheles merus
AMEM015770
N
0.656
AFAF004631
Anopheles farauti
AFAF004631
N
0.656
AEPI007457
Anopheles epiroticus
AEPI007457
N
0.656
ACHR000824
Anopheles christyi
ACHR000824
N
0.656
ACOM023536
Anopheles coluzzii
ACOM023536
N
0.656
ADIR010513
Anopheles dirus
ADIR010513
N
0.656
AATE020748
Anopheles atroparvus
AATE020748
N
0.656
AALB002196
Anopheles albimanus
AALB002196
N
0.656
SPU_009282
Strongylocentrotus purpuratus
SPU_009282
N
0.655
ENSFCAG00000026463
Felis catus
ENSFCAG00000026463
N
0.654
HelroG188630
Helobdella robusta
HelroG188630
N
0.653
Sakowv30017721m.g
Saccoglossus kowalevskii
Sakowv30017721m.g
N
0.653
CapteG156119
Capitella teleta
CapteG156119
N
0.646
ENSCJAG00000006608
Callithrix jacchus
ENSCJAG00000006608
N
0.620
fgenesh2_pg.scaffold_137000001
Branchiostoma floridae
fgenesh2_pg.scaffold_137000001
N
0.620
GA26137
Drosophila pseudoobscura
FBgn0247513
N
0.619
GL26801
Drosophila persimilis
FBgn0164382
N
0.619
TsM_000047400
Taenia solium
TsM_000047400
N
0.618
TASK_0000875901
Taenia asiatica
TASK_0000875901
N
0.618
SMU15005679
Schmidtea mediterranea
SMU15005679
N
0.618
ECANG7_05376
Echinococcus canadensis
ECANG7_05376
N
0.618
PXEA_0001727801
Protopolystoma xenopodis
PXEA_0001727801
N
0.618
HDID_0000207001
Hymenolepis diminuta
HDID_0000207001
N
0.618
MCOS_0000928101
Mesocestoides corti
MCOS_0000928101
N
0.618
EmuJ_000113200
Echinococcus multilocularis
EmuJ_000113200
N
0.618
LCUP013669
Lucilia cuprina
LCUP013669
N
0.615
ENSGGOG00000024929
Gorilla gorilla
ENSGGOG00000024929
N
0.615
A_05744
Schistosoma haematobium
A_05744
N
0.611
SCUD_0000923501
Schistosoma curassoni
SCUD_0000923501
N
0.611
Smp_154640
Schistosoma mansoni
Smp_154640
N
0.611
D915_15883
Fasciola hepatica
D915_15883
N
0.611
SMTD_0000014601
Schistosoma mattheei
SMTD_0000014601
N
0.611
Sjc_0000110
Schistosoma japonicum
Sjc_0000110
N
0.611
SROB_0000607501
Schistosoma rodhaini
SROB_0000607501
N
0.611
T265_02983
Opisthorchis viverrini
T265_02983
N
0.611
TriadG53566
Trichoplax adhaerens
TriadG53566
N
0.607
HMEL010720
Heliconius melpomene
HMEL010720
N
0.607
KGM_12870
Danaus plexippus
KGM_12870
N
0.607
ENSPPYG00000012585
Pongo abelii
ENSPPYG00000012585
N
0.603
ENSCSAVG00000010367
Ciona savignyi
ENSCSAVG00000010367
N
0.598
GG18291
Drosophila erecta
FBgn0110507
N
0.595
GE15824
Drosophila yakuba
FBgn0233388
N
0.595
GD16931
Drosophila simulans
FBgn0188511
N
0.591
dalao
Drosophila melanogaster
FBgn0030093
N
0.591
GM13722
Drosophila sechellia
FBgn0168653
N
0.591
SMU15025606
Schmidtea mediterranea
SMU15025606
N
0.589
GH12291
Drosophila grimshawi
FBgn0119770
N
0.586
GK25765
Drosophila willistoni
FBgn0227724
N
0.586
GF19131
Drosophila ananassae
FBgn0096142
N
0.586
MDOA009352
Musca domestica
MDOA009352
N
0.586
LotgiG111061
Lottia gigantea
LotgiG111061
N
0.585
ENSGGOG00000026277
Gorilla gorilla
ENSGGOG00000026277
N
0.578
TTRE_0000149701
Trichuris trichiura
TTRE_0000149701
N
0.577
D918_01415
Trichuris suis
D918_01415
N
0.577
TMUE_s0023006500
Trichuris muris
TMUE_s0023006500
N
0.577
BGIBMGA009228
Bombyx mori
BGIBMGA009228
N
0.575
GJ14880
Drosophila virilis
FBgn0202084
N
0.549
GI15536
Drosophila mojavensis
FBgn0138285
N
0.549
csin103376
Clonorchis sinensis
csin103376
N
0.542
SSLN_0001888901
Schistocephalus solidus
SSLN_0001888901
N
0.539
XP_002158206.1
Hydra magnipapillata
XP_002158206.1
N
0.518
EVEC_0000378901
Enterobius vermicularis
EVEC_0000378901
N
0.505
CLEC007658
Cimex lectularius
CLEC007658
N
0.499
DME_0000063901
Dracunculus medinensis
DME_0000063901
N
0.491
OESDEN_21929
Oesophagostomum dentatum
OESDEN_21929
N
0.487
HPBE_0000083501
Heligmosomoides bakeri
HPBE_0000083501
N
0.487
OESDEN_12607
Oesophagostomum dentatum
OESDEN_12607
N
0.487
ACAC_0000207501
Angiostrongylus cantonensis
ACAC_0000207501
N
0.487
NECAME_16117
Necator americanus
NECAME_16117
N
0.487
HPLM_0001658301
Haemonchus placei
HPLM_0001658301
N
0.487
SVUK_0000819801
Strongylus vulgaris
SVUK_0000819801
N
0.487
HCOI00569400
Haemonchus contortus
HCOI00569400
N
0.487
ANCDUO_12071
Ancylostoma duodenale
ANCDUO_12071
N
0.487
TELCIR_14354
Teladorsagia circumcincta
TELCIR_14354
N
0.487
HCOI00022200
Haemonchus contortus
HCOI00022200
N
0.487
ANCCEY_02937
Ancylostoma ceylanicum
ANCCEY_02937
N
0.487
ANCCAN_03785
Ancylostoma caninum
ANCCAN_03785
N
0.487
ANCCAN_09575
Ancylostoma caninum
ANCCAN_09575
N
0.487
nLs.2.1.2.g01047
Litomosoides sigmodontis
nLs.2.1.2.g01047
N
0.484
nOo.2.0.1.g01360
Onchocerca ochengi
nOo.2.0.1.g01360
N
0.484
OFLC_0001285101
Onchocerca flexuosa
OFLC_0001285101
N
0.484
nDi.2.2.2.g02092
Dirofilaria immitis
nDi.2.2.2.g02092
N
0.484
Bm7076
Brugia malayi
Bm7076
N
0.484
EEL_0000522201
Elaeophora elaphi
EEL_0000522201
N
0.484
WUBG_07283
Wuchereria bancrofti
WUBG_07283
N
0.484
nAv.1.0.1.g03900
Acanthocheilonema viteae
nAv.1.0.1.g03900
N
0.484
LOAG_01279
Loa loa
LOAG_01279
N
0.484
TCLT_0000145301
Thelazia callipaeda
TCLT_0000145301
N
0.484
WBGene00245293
Onchocerca volvulus
WBGene00245293
N
0.484
ML45008a
Mnemiopsis leidyi
ML45008a
N
0.478
MhA1_Contig1809.frz3.gene8
Meloidogyne hapla
MhA1_Contig1809.frz3.gene8
N
0.473
Aqu1.224100
Amphimedon queenslandica
Aqu1.224100
N
0.471
ALUE_0000987201
Ascaris lumbricoides
ALUE_0000987201
N
0.459
ASIM_0001578601
Anisakis simplex
ASIM_0001578601
N
0.459
ASIM_0001639001
Anisakis simplex
ASIM_0001639001
N
0.459
ASU_02248
Ascaris suum
ASU_02248
N
0.459
SMUV_0000644601
Syphacia muris
SMUV_0000644601
N
0.459
RSKR_0000347900
Rhabditophanes kr3021
RSKR_0000347900
N
0.446
L889_g3706
Steinernema feltiae
L889_g3706
N
0.444
Minc14081
Meloidogyne incognita
Minc14081
N
0.437
maker-nMf.1.1.scaf01126-augustus-gene-0.13
Meloidogyne floridensis
maker-nMf.1.1.scaf01126-augustus-gene-0.13
N
0.437
snap_masked-nMf.1.1.scaf27159-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf27159-processed-gene-0.2
N
0.437
swsn-3
Caenorhabditis elegans
WBGene00022182
N
0.433
CBG09815
Caenorhabditis briggsae
CBG09815
N
0.427