CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HHAL002088-PA
(
Halyomorpha halys
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
HHAL002088-PA
T334843_2.00
Misc (2018-Jan-19)
NCBI Gene Info:
This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HHAL002088-PA
Sox
82
150
PEKPLMPYMRYSRKVWDQVKARNPELKLWQIGKIIGQMWRDLPDDEKTDYVNEYEAEKLEYEKTLKAYH
Links
Other
Sox
family TFs
Other
Halyomorpha halys
TFs
158 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LDEC003494
Leptinotarsa decemlineata
LDEC003494
N
0.730
TC007745
Tribolium castaneum
TC007745
N
0.730
L798_00593
Zootermopsis nevadensis
L798_00593
N
0.728
Hsal_01302--XP_395543.3_APIME
Harpegnathos saltator
Hsal_01302--XP_395543.3_APIME
N
0.728
Cflo_00654--XP_395543.3_APIME
Camponotus floridanus
Cflo_00654--XP_395543.3_APIME
N
0.728
ACEP21543
Atta cephalotes
ACEP21543
N
0.728
YQE_02381
Dendroctonus ponderosae
YQE_02381
N
0.728
GB50847
Apis mellifera
GB50847
N
0.728
NV11999
Nasonia vitripennis
NV11999
N
0.728
DAPPUDRAFT_305068
Daphnia pulex
DAPPUDRAFT_305068
N
0.722
PPAI002058
Phlebotomus papatasi
PPAI002058
N
0.721
ENSONIG00000006293
Oreochromis niloticus
ENSONIG00000006293
N
0.719
smarce1
Oryzias latipes
ENSORLG00000018629
N
0.719
ENSXMAG00000002642
Xiphophorus maculatus
ENSXMAG00000002642
N
0.719
smarce1
Takifugu rubripes
ENSTRUG00000012899
N
0.719
ENSPFOG00000009890
Poecilia formosa
ENSPFOG00000009890
N
0.719
smarce1
Tetraodon nigroviridis
ENSTNIG00000014009
N
0.719
ENSGMOG00000002045
Gadus morhua
ENSGMOG00000002045
N
0.719
ENSPFOG00000019561
Poecilia formosa
ENSPFOG00000019561
N
0.719
SMAR004982
Strigamia maritima
SMAR004982
N
0.711
ISCW021016
Ixodes scapularis
ISCW021016
N
0.707
CLEC009203
Cimex lectularius
CLEC009203
N
0.707
HHAL007378-PA
Halyomorpha halys
HHAL007378-PA
N
0.705
AAH41216
Xenopus laevis
AAH41216
N
0.704
NEMVEDRAFT_v1g177453
Nematostella vectensis
NEMVEDRAFT_v1g177453
N
0.704
AAEL010903
Aedes aegypti
AAEL010903
N
0.699
CpipJ_CPIJ007400
Culex pipiens
CpipJ_CPIJ007400
N
0.699
CPIJ007400
Culex quinquefasciatus
CPIJ007400
N
0.699
CPIJ018416
Culex quinquefasciatus
CPIJ018416
N
0.699
CpipJ_CPIJ018416
Culex pipiens
CpipJ_CPIJ018416
N
0.699
SMARCE1
Gasterosteus aculeatus
ENSGACG00000018114
N
0.697
ENSOCUG00000016848
Oryctolagus cuniculus
ENSOCUG00000016848
N
0.697
AC123471.1
Rattus norvegicus
ENSRNOG00000018377
N
0.693
LLOJ006040
Lutzomyia longipalpis
LLOJ006040
N
0.686
CLEC001104
Cimex lectularius
CLEC001104
N
0.685
ENSCING00000007774
Ciona intestinalis
ENSCING00000007774
N
0.681
ACYPI008028
Acyrthosiphon pisum
ACYPI008028
N
0.679
SPU_009282
Strongylocentrotus purpuratus
SPU_009282
N
0.678
Sakowv30017721m.g
Saccoglossus kowalevskii
Sakowv30017721m.g
N
0.676
HelroG188630
Helobdella robusta
HelroG188630
N
0.670
CapteG156119
Capitella teleta
CapteG156119
N
0.664
ENSFCAG00000026463
Felis catus
ENSFCAG00000026463
N
0.658
ADAC004863
Anopheles darlingi
ADAC004863
N
0.652
ADIR010513
Anopheles dirus
ADIR010513
N
0.652
AEPI007457
Anopheles epiroticus
AEPI007457
N
0.652
AFAF004631
Anopheles farauti
AFAF004631
N
0.652
AATE020748
Anopheles atroparvus
AATE020748
N
0.652
ACOM023536
Anopheles coluzzii
ACOM023536
N
0.652
ACHR000824
Anopheles christyi
ACHR000824
N
0.652
ACUA002517
Anopheles culicifacies
ACUA002517
N
0.652
AFUN008276
Anopheles funestus
AFUN008276
N
0.652
AMAM007470
Anopheles maculatus
AMAM007470
N
0.652
AMIN003302
Anopheles minimus
AMIN003302
N
0.652
AQUA007127
Anopheles quadriannulatus
AQUA007127
N
0.652
ASIS021704
Anopheles sinensis
ASIS021704
N
0.652
AMEM015770
Anopheles merus
AMEM015770
N
0.652
AARA006951
Anopheles arabiensis
AARA006951
N
0.652
ASTEI00336
Anopheles stephensi
ASTEI00336
N
0.652
AALB002196
Anopheles albimanus
AALB002196
N
0.652
AMEC010472
Anopheles melas
AMEC010472
N
0.652
AGAP001994
Anopheles gambiae
AGAP001994
N
0.652
EmuJ_000113200
Echinococcus multilocularis
EmuJ_000113200
N
0.643
ECANG7_05376
Echinococcus canadensis
ECANG7_05376
N
0.643
TASK_0000875901
Taenia asiatica
TASK_0000875901
N
0.643
MCOS_0000928101
Mesocestoides corti
MCOS_0000928101
N
0.643
HDID_0000207001
Hymenolepis diminuta
HDID_0000207001
N
0.643
TsM_000047400
Taenia solium
TsM_000047400
N
0.643
PXEA_0001727801
Protopolystoma xenopodis
PXEA_0001727801
N
0.641
SMU15005679
Schmidtea mediterranea
SMU15005679
N
0.641
ENSGGOG00000024929
Gorilla gorilla
ENSGGOG00000024929
N
0.636
ENSCJAG00000006608
Callithrix jacchus
ENSCJAG00000006608
N
0.635
A_05744
Schistosoma haematobium
A_05744
N
0.634
T265_02983
Opisthorchis viverrini
T265_02983
N
0.634
SROB_0000607501
Schistosoma rodhaini
SROB_0000607501
N
0.634
SMTD_0000014601
Schistosoma mattheei
SMTD_0000014601
N
0.634
SCUD_0000923501
Schistosoma curassoni
SCUD_0000923501
N
0.634
D915_15883
Fasciola hepatica
D915_15883
N
0.634
Sjc_0000110
Schistosoma japonicum
Sjc_0000110
N
0.634
Smp_154640
Schistosoma mansoni
Smp_154640
N
0.634
GL26801
Drosophila persimilis
FBgn0164382
N
0.631
KGM_12870
Danaus plexippus
KGM_12870
N
0.631
HMEL010720
Heliconius melpomene
HMEL010720
N
0.631
GA26137
Drosophila pseudoobscura
FBgn0247513
N
0.631
LCUP013669
Lucilia cuprina
LCUP013669
N
0.628
ENSCSAVG00000010367
Ciona savignyi
ENSCSAVG00000010367
N
0.621
SMU15025606
Schmidtea mediterranea
SMU15025606
N
0.612
ENSPPYG00000012585
Pongo abelii
ENSPPYG00000012585
N
0.611
fgenesh2_pg.scaffold_137000001
Branchiostoma floridae
fgenesh2_pg.scaffold_137000001
N
0.607
GM13722
Drosophila sechellia
FBgn0168653
N
0.606
GD16931
Drosophila simulans
FBgn0188511
N
0.606
dalao
Drosophila melanogaster
FBgn0030093
N
0.606
GE15824
Drosophila yakuba
FBgn0233388
N
0.606
GG18291
Drosophila erecta
FBgn0110507
N
0.606
LotgiG111061
Lottia gigantea
LotgiG111061
N
0.602
TTRE_0000149701
Trichuris trichiura
TTRE_0000149701
N
0.601
MDOA009352
Musca domestica
MDOA009352
N
0.601
TMUE_s0023006500
Trichuris muris
TMUE_s0023006500
N
0.601
D918_01415
Trichuris suis
D918_01415
N
0.601
GH12291
Drosophila grimshawi
FBgn0119770
N
0.599
GF19131
Drosophila ananassae
FBgn0096142
N
0.599
GK25765
Drosophila willistoni
FBgn0227724
N
0.599
BGIBMGA009228
Bombyx mori
BGIBMGA009228
N
0.598
TriadG53566
Trichoplax adhaerens
TriadG53566
N
0.592
ENSGGOG00000026277
Gorilla gorilla
ENSGGOG00000026277
N
0.586
csin103376
Clonorchis sinensis
csin103376
N
0.565
SSLN_0001888901
Schistocephalus solidus
SSLN_0001888901
N
0.562
GI15536
Drosophila mojavensis
FBgn0138285
N
0.561
GJ14880
Drosophila virilis
FBgn0202084
N
0.561
XP_002158206.1
Hydra magnipapillata
XP_002158206.1
N
0.537
EVEC_0000378901
Enterobius vermicularis
EVEC_0000378901
N
0.528
DME_0000063901
Dracunculus medinensis
DME_0000063901
N
0.514
HCOI00022200
Haemonchus contortus
HCOI00022200
N
0.511
NECAME_16117
Necator americanus
NECAME_16117
N
0.511
SVUK_0000819801
Strongylus vulgaris
SVUK_0000819801
N
0.511
TELCIR_14354
Teladorsagia circumcincta
TELCIR_14354
N
0.511
OESDEN_21929
Oesophagostomum dentatum
OESDEN_21929
N
0.511
OESDEN_12607
Oesophagostomum dentatum
OESDEN_12607
N
0.511
HPLM_0001658301
Haemonchus placei
HPLM_0001658301
N
0.511
HCOI00569400
Haemonchus contortus
HCOI00569400
N
0.511
HPBE_0000083501
Heligmosomoides bakeri
HPBE_0000083501
N
0.511
ANCCAN_09575
Ancylostoma caninum
ANCCAN_09575
N
0.511
ANCCEY_02937
Ancylostoma ceylanicum
ANCCEY_02937
N
0.511
ANCDUO_12071
Ancylostoma duodenale
ANCDUO_12071
N
0.511
ACAC_0000207501
Angiostrongylus cantonensis
ACAC_0000207501
N
0.511
ANCCAN_03785
Ancylostoma caninum
ANCCAN_03785
N
0.511
nAv.1.0.1.g03900
Acanthocheilonema viteae
nAv.1.0.1.g03900
N
0.507
nLs.2.1.2.g01047
Litomosoides sigmodontis
nLs.2.1.2.g01047
N
0.507
EEL_0000522201
Elaeophora elaphi
EEL_0000522201
N
0.507
nOo.2.0.1.g01360
Onchocerca ochengi
nOo.2.0.1.g01360
N
0.507
nDi.2.2.2.g02092
Dirofilaria immitis
nDi.2.2.2.g02092
N
0.507
Bm7076
Brugia malayi
Bm7076
N
0.507
TCLT_0000145301
Thelazia callipaeda
TCLT_0000145301
N
0.507
LOAG_01279
Loa loa
LOAG_01279
N
0.507
WUBG_07283
Wuchereria bancrofti
WUBG_07283
N
0.507
WBGene00245293
Onchocerca volvulus
WBGene00245293
N
0.507
OFLC_0001285101
Onchocerca flexuosa
OFLC_0001285101
N
0.507
MhA1_Contig1809.frz3.gene8
Meloidogyne hapla
MhA1_Contig1809.frz3.gene8
N
0.496
CLEC007658
Cimex lectularius
CLEC007658
N
0.486
Aqu1.224100
Amphimedon queenslandica
Aqu1.224100
N
0.484
SMUV_0000644601
Syphacia muris
SMUV_0000644601
N
0.482
ALUE_0000987201
Ascaris lumbricoides
ALUE_0000987201
N
0.482
ASU_02248
Ascaris suum
ASU_02248
N
0.482
ASIM_0001578601
Anisakis simplex
ASIM_0001578601
N
0.482
ASIM_0001639001
Anisakis simplex
ASIM_0001639001
N
0.482
RSKR_0000347900
Rhabditophanes kr3021
RSKR_0000347900
N
0.470
ML45008a
Mnemiopsis leidyi
ML45008a
N
0.467
Minc14081
Meloidogyne incognita
Minc14081
N
0.461
L889_g3706
Steinernema feltiae
L889_g3706
N
0.461
maker-nMf.1.1.scaf01126-augustus-gene-0.13
Meloidogyne floridensis
maker-nMf.1.1.scaf01126-augustus-gene-0.13
N
0.461
snap_masked-nMf.1.1.scaf27159-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf27159-processed-gene-0.2
N
0.461
swsn-3
Caenorhabditis elegans
WBGene00022182
N
0.457
CBG09815
Caenorhabditis briggsae
CBG09815
N
0.450
scaffold237-EXSNAP2012.36
Pristionchus exspectatus
scaffold237-EXSNAP2012.36
N
0.435
PPA02543
Pristionchus pacificus
PPA02543
N
0.435
MCINX003696
Melitaea cinxia
MCINX003696
N
0.428
SMU15003232
Schmidtea mediterranea
SMU15003232
N
0.422
GPLIN_000239300
Globodera pallida
GPLIN_000239300
N
0.418
BGLB013830
Biomphalaria glabrata
BGLB013830
N
0.416