estExt_fgenesh1_kg.C_12090001 (Phytophthora capsici)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 estExt_fgenesh1_kg.C_12090001 T335190_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_kg.C_12090001 Sox 28 96
estExt_fgenesh1_kg.C_12090001 Sox 116 184

Links

Other Sox family TFs
Other Phytophthora capsici TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F443_05401 Phytophthora parasitica F443_05401 N 0.720
PITG_16117 Phytophthora infestans PITG_16117 N 0.710
fgenesh_scip_prom.46568.1753 Phytophthora kernoviae fgenesh_scip_prom.46568.1753 N 0.706
Phyra73033 Phytophthora ramorum Phyra73033 N 0.692
fgenesh_scip_prom.28083.225 Phytophthora lateralis fgenesh_scip_prom.28083.225 N 0.692
PYU1_G009481 Pythium ultimum PYU1_G009481 N 0.690
maker-pir_contig_78-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_78-fgenesh-gene-0.0 N 0.689
ALNC14_025770 Albugo laibachii ALNC14_025770 N 0.680
maker-pve_contig_1-fgenesh-gene-1.10 Pythium vexans maker-pve_contig_1-fgenesh-gene-1.10 N 0.661
maker-pag1_scaffold_208-fgenesh-gene-0.7 Pythium aphanidermatum maker-pag1_scaffold_208-fgenesh-gene-0.7 N 0.649
maker-par_contig_8731-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_8731-fgenesh-gene-0.0 N 0.631
estExt_fgenesh1_kg.C_40116 Phytophthora capsici estExt_fgenesh1_kg.C_40116 N 0.586
SPRG_05304 Saprolegnia parasitica SPRG_05304 N 0.534
HpaG806488 Hyaloperonospora arabidopsidis HpaG806488 N 0.474
maker-pve_contig_1-fgenesh-gene-1.21 Pythium vexans maker-pve_contig_1-fgenesh-gene-1.21 N 0.464
SMU15027649 Schmidtea mediterranea SMU15027649 N 0.418