CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0
(
Meloidogyne floridensis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0
T336078_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0-mRNA-1
Sox
94
127
IKRPLNAYMIWTRQERKRILADDPKMKMNEVSKA
Links
Other
Sox
family TFs
Other
Meloidogyne floridensis
TFs
87 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PEQ_0000455701
Parascaris equorum
PEQ_0000455701
N
0.570
RSKR_0000394100
Rhabditophanes kr3021
RSKR_0000394100
N
0.549
D918_08316
Trichuris suis
D918_08316
N
0.504
SOX6
Echinops telfairi
ENSETEG00000001898
I
0.481
SOX6
Erinaceus europaeus
ENSEEUG00000006749
I
0.481
ENSMEUG00000008151
Macropus eugenii
ENSMEUG00000008151
I
0.481
SOX6
Procavia capensis
ENSPCAG00000001398
N
0.481
ENSTSYG00000012536
Tarsius syrichta
ENSTSYG00000012536
I
0.481
SOX6
Tupaia belangeri
ENSTBEG00000002476
I
0.481
SOX6
Choloepus hoffmanni
ENSCHOG00000005751
I
0.481
SOX13
Microcebus murinus
ENSMICG00000009236
I
0.481
SOX5
Sorex araneus
ENSSARG00000007963
I
0.481
TCLT_0000083701
Thelazia callipaeda
TCLT_0000083701
I
0.481
ENSTGUG00000002931
Taeniopygia guttata
ENSTGUG00000002931
I
0.475
SOX13
Felis catus
ENSFCAG00000002900
I
0.475
Minc08472
Meloidogyne incognita
Minc08472
N
0.472
ASU_11889
Ascaris suum
ASU_11889
N
0.468
ALUE_0001931801
Ascaris lumbricoides
ALUE_0001931801
N
0.468
TCNE_0001183201
Toxocara canis
TCNE_0001183201
N
0.468
GLOINDRAFT_339213
Rhizophagus irregularis
GLOINDRAFT_339213
N
0.465
OESDEN_18796
Oesophagostomum dentatum
OESDEN_18796
N
0.461
ADIR005630
Anopheles dirus
ADIR005630
I
0.460
MESCA000459
Megaselia scalaris
MESCA000459
I
0.460
ANCDUO_25812
Ancylostoma duodenale
ANCDUO_25812
N
0.456
NECAME_14932
Necator americanus
NECAME_14932
N
0.455
AEPI003628
Anopheles epiroticus
AEPI003628
I
0.454
AARA005391
Anopheles arabiensis
AARA005391
I
0.454
CpipJ_CPIJ012042
Culex pipiens
CpipJ_CPIJ012042
I
0.454
AALB009868
Anopheles albimanus
AALB009868
I
0.454
MCINX002905
Melitaea cinxia
MCINX002905
I
0.454
ACOM022800
Anopheles coluzzii
ACOM022800
I
0.454
ACUA008554
Anopheles culicifacies
ACUA008554
I
0.454
AQUA001262
Anopheles quadriannulatus
AQUA001262
I
0.454
LCUP001585
Lucilia cuprina
LCUP001585
I
0.454
BGIBMGA003080
Bombyx mori
BGIBMGA003080
I
0.454
CPIJ012042
Culex quinquefasciatus
CPIJ012042
I
0.454
AMAM006332
Anopheles maculatus
AMAM006332
I
0.454
LLOJ005525
Lutzomyia longipalpis
LLOJ005525
I
0.454
AMEC012053
Anopheles melas
AMEC012053
I
0.454
AMEM014190
Anopheles merus
AMEM014190
I
0.454
AMIN009301
Anopheles minimus
AMIN009301
I
0.454
ASTEI06407
Anopheles stephensi
ASTEI06407
I
0.454
SMAR010127
Strigamia maritima
SMAR010127
N
0.451
SOX17
Procavia capensis
ENSPCAG00000003188
I
0.451
Ocbimv22020621m.g
Octopus bimaculoides
Ocbimv22020621m.g
N
0.450
ACEP10855
Atta cephalotes
ACEP10855
I
0.449
NBR_0002216901
Nippostrongylus brasiliensis
NBR_0002216901
I
0.449
SOX12
Sus scrofa
ENSSSCG00000021920
I
0.449
NBR_0000360901
Nippostrongylus brasiliensis
NBR_0000360901
I
0.449
CaO19.1730
Candida albicans
CaO19.1730
N
0.445
CaO19.9298
Candida albicans
CaO19.9298
N
0.445
HMEL016850
Heliconius melpomene
HMEL016850
I
0.444
KGM_05609
Danaus plexippus
KGM_05609
N
0.444
AMEC014560
Anopheles melas
AMEC014560
I
0.444
ACEP25857
Atta cephalotes
ACEP25857
I
0.444
BGLB002734
Biomphalaria glabrata
BGLB002734
I
0.444
CPIJ012500
Culex quinquefasciatus
CPIJ012500
N
0.444
AGAP012033
Anopheles gambiae
AGAP012033
I
0.444
GB40960
Apis mellifera
GB40960
I
0.444
ASIS016076
Anopheles sinensis
ASIS016076
N
0.444
AAEL000792
Aedes aegypti
AAEL000792
I
0.444
AARA000827
Anopheles arabiensis
AARA000827
I
0.444
YQE_13042
Dendroctonus ponderosae
YQE_13042
I
0.444
Cflo_01077--XP_001122045.1_APIME
Camponotus floridanus
Cflo_01077--XP_001122045.1_APIME
N
0.444
Hsal_04214--XP_001122045.1_APIME
Harpegnathos saltator
Hsal_04214--XP_001122045.1_APIME
N
0.444
LDEC007549
Leptinotarsa decemlineata
LDEC007549
N
0.444
CpipJ_CPIJ012500
Culex pipiens
CpipJ_CPIJ012500
N
0.444
SINV16626
Solenopsis invicta
SINV16626
I
0.444
ACOM026664
Anopheles coluzzii
ACOM026664
N
0.444
AFUN009319
Anopheles funestus
AFUN009319
I
0.444
ADIR009659
Anopheles dirus
ADIR009659
I
0.444
PHUM433270
Pediculus humanus
PHUM433270
N
0.444
RPRC012125
Rhodnius prolixus
RPRC012125
N
0.444
ACUA011783
Anopheles culicifacies
ACUA011783
N
0.444
SMUV_0000949901
Syphacia muris
SMUV_0000949901
N
0.439
DME_0000639401
Dracunculus medinensis
DME_0000639401
N
0.439
MhA1_Contig389.frz3.gene3
Meloidogyne hapla
MhA1_Contig389.frz3.gene3
N
0.439
GLOINDRAFT_28614
Rhizophagus irregularis
GLOINDRAFT_28614
N
0.438
SOX9
Dasypus novemcinctus
ENSDNOG00000033826
I
0.438
M404DRAFT_79773
Pisolithus tinctorius
M404DRAFT_79773
N
0.437
Sjc_0095610
Schistosoma japonicum
Sjc_0095610
N
0.435
WUBG_09447
Wuchereria bancrofti
WUBG_09447
N
0.420
LOAG_07813
Loa loa
LOAG_07813
N
0.420
GPUH_0000691201
Gongylonema pulchrum
GPUH_0000691201
N
0.419
GPUH_0001196001
Gongylonema pulchrum
GPUH_0001196001
N
0.419
orange1.1g029982m.g
Citrus sinensis
orange1.1g029982m.g
I
0.417
OS02G0258250
Oryza sativa
OS02G0258250
N
0.416