YQE_13042 (Dendroctonus ponderosae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 YQE_13042 T333355_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Sox15
M03973_2.00 		Drosophila melanogaster
WYTGTTCGGTD
HACCGAACARW		 SELEX
Nitta et al.(2015)
Sox15_1 		0.417 0.972
Sox15
M03974_2.00 		Drosophila melanogaster
VACAATDNCATTGTN
NACAATGNHATTGTB		 SELEX
Nitta et al.(2015)
Sox15_2 		0.417 0.972
Sox15
M06450_2.00 		Drosophila melanogaster
RWACAATR
YATTGTWY		 B1H
Zhu et al.(2011)
Sox15_SANGER_5_FBgn0005613 		0.417 0.972
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENN70259 Sox 141 176

Links

Other Sox family TFs
Other Dendroctonus ponderosae TFs

208 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GB40960 Apis mellifera GB40960 I 0.741
AARA000827 Anopheles arabiensis AARA000827 I 0.741
AGAP012033 Anopheles gambiae AGAP012033 I 0.741
ADIR009659 Anopheles dirus ADIR009659 I 0.741
SINV16626 Solenopsis invicta SINV16626 I 0.741
AMEC014560 Anopheles melas AMEC014560 I 0.741
BGLB002734 Biomphalaria glabrata BGLB002734 I 0.741
AFUN009319 Anopheles funestus AFUN009319 I 0.741
ACEP25857 Atta cephalotes ACEP25857 I 0.741
HMEL016850 Heliconius melpomene HMEL016850 I 0.741
AAEL000792 Aedes aegypti AAEL000792 I 0.741
CPIJ012500 Culex quinquefasciatus CPIJ012500 N 0.735
SMAR010127 Strigamia maritima SMAR010127 N 0.735
PHUM433270 Pediculus humanus PHUM433270 N 0.735
CpipJ_CPIJ012500 Culex pipiens CpipJ_CPIJ012500 N 0.735
RPRC012125 Rhodnius prolixus RPRC012125 N 0.735
Cflo_01077--XP_001122045.1_APIME Camponotus floridanus Cflo_01077--XP_001122045.1_APIME N 0.735
ACOM026664 Anopheles coluzzii ACOM026664 N 0.735
ASIS016076 Anopheles sinensis ASIS016076 N 0.735
LDEC007549 Leptinotarsa decemlineata LDEC007549 N 0.735
Hsal_04214--XP_001122045.1_APIME Harpegnathos saltator Hsal_04214--XP_001122045.1_APIME N 0.735
KGM_05609 Danaus plexippus KGM_05609 N 0.735
ACUA011783 Anopheles culicifacies ACUA011783 N 0.735
Ocbimv22020621m.g Octopus bimaculoides Ocbimv22020621m.g N 0.706
SOX17 Procavia capensis ENSPCAG00000003188 I 0.701
AMIN008219 Anopheles minimus AMIN008219 I 0.695
BGIBMGA004367 Bombyx mori BGIBMGA004367 I 0.695
ACHR009359 Anopheles christyi ACHR009359 I 0.692
AMAM018985 Anopheles maculatus AMAM018985 I 0.692
AATE012157 Anopheles atroparvus AATE012157 N 0.688
ASTEI06129 Anopheles stephensi ASTEI06129 N 0.686
AEPI007946 Anopheles epiroticus AEPI007946 N 0.686
L798_02392 Zootermopsis nevadensis L798_02392 I 0.679
ACEP10855 Atta cephalotes ACEP10855 I 0.667
PPAI008595 Phlebotomus papatasi PPAI008595 N 0.666
ASTEI06407 Anopheles stephensi ASTEI06407 I 0.663
ACOM022800 Anopheles coluzzii ACOM022800 I 0.663
AMEC012053 Anopheles melas AMEC012053 I 0.663
LLOJ005525 Lutzomyia longipalpis LLOJ005525 I 0.663
LCUP001585 Lucilia cuprina LCUP001585 I 0.663
AEPI003628 Anopheles epiroticus AEPI003628 I 0.663
BGIBMGA003080 Bombyx mori BGIBMGA003080 I 0.663
AARA005391 Anopheles arabiensis AARA005391 I 0.663
AMIN009301 Anopheles minimus AMIN009301 I 0.663
AMEM014190 Anopheles merus AMEM014190 I 0.663
SOX9 Dasypus novemcinctus ENSDNOG00000033826 I 0.663
ENSTTRG00000005878 Tursiops truncatus ENSTTRG00000005878 I 0.662
ENSPSIG00000009504 Pelodiscus sinensis ENSPSIG00000009504 I 0.659
CPIJ012042 Culex quinquefasciatus CPIJ012042 I 0.656
ACUA008554 Anopheles culicifacies ACUA008554 I 0.656
MCINX002905 Melitaea cinxia MCINX002905 I 0.656
MESCA000459 Megaselia scalaris MESCA000459 I 0.656
AQUA001262 Anopheles quadriannulatus AQUA001262 I 0.656
AALB009868 Anopheles albimanus AALB009868 I 0.656
ADIR005630 Anopheles dirus ADIR005630 I 0.656
CpipJ_CPIJ012042 Culex pipiens CpipJ_CPIJ012042 I 0.656
AMAM006332 Anopheles maculatus AMAM006332 I 0.656
AFAF017335 Anopheles farauti AFAF017335 I 0.642
TC009854 Tribolium castaneum TC009854 I 0.635
SOX9 Pteropus vampyrus ENSPVAG00000010505 I 0.623
ENSDORG00000012440 Dipodomys ordii ENSDORG00000012440 I 0.623
ENSVPAG00000000908 Vicugna pacos ENSVPAG00000000908 I 0.623
SOX10 Ochotona princeps ENSOPRG00000013575 I 0.623
SOX10 Procavia capensis ENSPCAG00000005913 I 0.623
SOX10 Erinaceus europaeus ENSEEUG00000011263 I 0.623
ENSDORG00000003967 Dipodomys ordii ENSDORG00000003967 I 0.623
SINV19753 Solenopsis invicta SINV19753 I 0.621
LotgiG88815 Lottia gigantea LotgiG88815 I 0.621
BGLB010904 Biomphalaria glabrata BGLB010904 I 0.621
ISCW009925 Ixodes scapularis ISCW009925 I 0.620
ENSPMAG00000010371 Petromyzon marinus ENSPMAG00000010371 I 0.620
AFUN010199 Anopheles funestus AFUN010199 I 0.616
NBR_0002216901 Nippostrongylus brasiliensis NBR_0002216901 I 0.615
NBR_0000360901 Nippostrongylus brasiliensis NBR_0000360901 I 0.615
Hsal_04828--XP_001122993.1_APIME Harpegnathos saltator Hsal_04828--XP_001122993.1_APIME I 0.614
RPRC012780 Rhodnius prolixus RPRC012780 I 0.614
ENSFALG00000002572 Ficedula albicollis ENSFALG00000002572 I 0.614
XP_002935939 Xenopus tropicalis XP_002935939 I 0.614
sox9b Danio rerio ENSDARG00000043923 I 0.614
TC003791 Tribolium castaneum TC003791 I 0.614
ANCDUO_25812 Ancylostoma duodenale ANCDUO_25812 N 0.608
SOX12 Sus scrofa ENSSSCG00000021920 I 0.608
CLEC006961 Cimex lectularius CLEC006961 I 0.607
SOX13 Felis catus ENSFCAG00000002900 I 0.605
ENSTGUG00000002931 Taeniopygia guttata ENSTGUG00000002931 I 0.605
TCLT_0000083701 Thelazia callipaeda TCLT_0000083701 I 0.598
ENSTSYG00000012536 Tarsius syrichta ENSTSYG00000012536 I 0.598
ENSMEUG00000008151 Macropus eugenii ENSMEUG00000008151 I 0.598
SOX6 Echinops telfairi ENSETEG00000001898 I 0.598
SOX6 Erinaceus europaeus ENSEEUG00000006749 I 0.598
SOX6 Choloepus hoffmanni ENSCHOG00000005751 I 0.598
SOX6 Procavia capensis ENSPCAG00000001398 N 0.598
SOX13 Microcebus murinus ENSMICG00000009236 I 0.598
SOX5 Sorex araneus ENSSARG00000007963 I 0.598
SOX6 Tupaia belangeri ENSTBEG00000002476 I 0.598
SOX10 Meleagris gallopavo ENSMGAG00000012508 I 0.576
Gfo_R009506 Geospiza fortis Gfo_R009506 I 0.576
D918_08316 Trichuris suis D918_08316 N 0.575
ENSPTRG00000005969 Pan troglodytes ENSPTRG00000005969 I 0.567
SOX1 Anolis carolinensis ENSACAG00000006346 I 0.567
CpipJ_CPIJ014424 Culex pipiens CpipJ_CPIJ014424 I 0.560
CPIJ014424 Culex quinquefasciatus CPIJ014424 I 0.560
ENSCPOG00000024750 Cavia porcellus ENSCPOG00000024750 I 0.559
ACAC_0000143401 Angiostrongylus cantonensis ACAC_0000143401 N 0.553
RPRC014334 Rhodnius prolixus RPRC014334 I 0.548
SINV19744 Solenopsis invicta SINV19744 I 0.548
CLEC006959 Cimex lectularius CLEC006959 I 0.548
ENSOARG00000009998 Ovis aries ENSOARG00000009998 I 0.548
ACEP10859 Atta cephalotes ACEP10859 I 0.548
SOX3 Pteropus vampyrus ENSPVAG00000003166 I 0.548
AMEC016085 Anopheles melas AMEC016085 I 0.547
ACUA026266 Anopheles culicifacies ACUA026266 I 0.547
AQUA004309 Anopheles quadriannulatus AQUA004309 I 0.547
ML23337a Mnemiopsis leidyi ML23337a N 0.545
ACUA026638 Anopheles culicifacies ACUA026638 I 0.543
AARA005393 Anopheles arabiensis AARA005393 I 0.543
AALB009865 Anopheles albimanus AALB009865 I 0.543
ADIR005633 Anopheles dirus ADIR005633 I 0.543
AEPI010515 Anopheles epiroticus AEPI010515 I 0.543
AMIN009304 Anopheles minimus AMIN009304 I 0.543
AMEC008804 Anopheles melas AMEC008804 I 0.543
MESCA009852 Megaselia scalaris MESCA009852 I 0.543
AFUN010196 Anopheles funestus AFUN010196 I 0.543
PPAI009257 Phlebotomus papatasi PPAI009257 N 0.542
ACOM034662 Anopheles coluzzii ACOM034662 I 0.541
AMIN001219 Anopheles minimus AMIN001219 I 0.541
AARA011914 Anopheles arabiensis AARA011914 I 0.541
ENSMEUG00000015665 Macropus eugenii ENSMEUG00000015665 I 0.537
L798_09360 Zootermopsis nevadensis L798_09360 N 0.530
AATE006542 Anopheles atroparvus AATE006542 N 0.522
CPIJ014016 Culex quinquefasciatus CPIJ014016 N 0.522
CpipJ_CPIJ014016 Culex pipiens CpipJ_CPIJ014016 N 0.522
L798_12045 Zootermopsis nevadensis L798_12045 I 0.521
L798_04020 Zootermopsis nevadensis L798_04020 N 0.520
nDi.2.2.2.g10379 Dirofilaria immitis nDi.2.2.2.g10379 I 0.518
CpipJ_CPIJ017659 Culex pipiens CpipJ_CPIJ017659 I 0.516
CPIJ017659 Culex quinquefasciatus CPIJ017659 I 0.516
L898_g3197 Steinernema monticolum L898_g3197 I 0.515
WUBG_09252 Wuchereria bancrofti WUBG_09252 I 0.511
nLs.2.1.2.g10155 Litomosoides sigmodontis nLs.2.1.2.g10155 I 0.511
SEPMUDRAFT_152382 Sphaerulina musiva SEPMUDRAFT_152382 N 0.509
ANCCAN_22368 Ancylostoma caninum ANCCAN_22368 N 0.509
ACEP25270 Atta cephalotes ACEP25270 N 0.506
ENSNLEG00000009528 Nomascus leucogenys ENSNLEG00000009528 I 0.496
genemark-nMf.1.1.scaf16788-processed-gene-0.1 Meloidogyne floridensis genemark-nMf.1.1.scaf16788-processed-gene-0.1 I 0.489
GLOINDRAFT_28614 Rhizophagus irregularis GLOINDRAFT_28614 N 0.488
HelroG148277 Helobdella robusta HelroG148277 N 0.485
YQE_08560 Dendroctonus ponderosae YQE_08560 I 0.483
ENSAMXG00000007582 Astyanax mexicanus ENSAMXG00000007582 I 0.479
AEPI007651 Anopheles epiroticus AEPI007651 N 0.478
AMAM022760 Anopheles maculatus AMAM022760 N 0.478
SPER_0000213401 Spirometra erinaceieuropaei SPER_0000213401 N 0.476
AMAM015893 Anopheles maculatus AMAM015893 I 0.475
DAPPUDRAFT_346928 Daphnia pulex DAPPUDRAFT_346928 N 0.473
ENSNLEG00000010228 Nomascus leucogenys ENSNLEG00000010228 I 0.463
GLYMA01G28253 Glycine max GLYMA01G28253 N 0.458
RSKR_0000394100 Rhabditophanes kr3021 RSKR_0000394100 N 0.456
SOX30 Procavia capensis ENSPCAG00000010619 N 0.450
LotgiG120517 Lottia gigantea LotgiG120517 I 0.450
PEQ_0000771101 Parascaris equorum PEQ_0000771101 I 0.446
MCINX011114 Melitaea cinxia MCINX011114 I 0.445
ACYPI006194 Acyrthosiphon pisum ACYPI006194 I 0.445
DAPPUDRAFT_35405 Daphnia pulex DAPPUDRAFT_35405 I 0.445
NV15963 Nasonia vitripennis NV15963 I 0.445
augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0 N 0.444
MPER_07337 Moniliophthora perniciosa MPER_07337 N 0.443
ENSDNOG00000034433 Dasypus novemcinctus ENSDNOG00000034433 N 0.443
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I 0.441
SOX11 Ornithorhynchus anatinus ENSOANG00000006361 N 0.437
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.437
HBP1 Homo sapiens ENSG00000105856 D 0.437
PXEA_0001829801 Protopolystoma xenopodis PXEA_0001829801 N 0.437
GRMZM2G144398 Zea mays GRMZM2G144398 N 0.436
NEMVEDRAFT_v1g163545 Nematostella vectensis NEMVEDRAFT_v1g163545 I 0.435
GLOINDRAFT_339213 Rhizophagus irregularis GLOINDRAFT_339213 N 0.435
NECAME_14932 Necator americanus NECAME_14932 N 0.434
GRMZM2G150348 Zea mays GRMZM2G150348 N 0.433
SPU_021407 Strongylocentrotus purpuratus SPU_021407 N 0.431
AQUA001259 Anopheles quadriannulatus AQUA001259 I 0.431
ACOM022803 Anopheles coluzzii ACOM022803 I 0.431
AMEM010579 Anopheles merus AMEM010579 I 0.431
ENSAMEG00000016773 Ailuropoda melanoleuca ENSAMEG00000016773 I 0.431
ENSCSAVG00000000494 Ciona savignyi ENSCSAVG00000000494 I 0.431
AGAP010923 Anopheles gambiae AGAP010923 I 0.431
OESDEN_18796 Oesophagostomum dentatum OESDEN_18796 N 0.428
ANCDUO_17471 Ancylostoma duodenale ANCDUO_17471 I 0.423
CGOC_0001130501 Cylicostephanus goldi CGOC_0001130501 I 0.420
CY34DRAFT_106474 Suillus luteus CY34DRAFT_106474 N 0.418
M404DRAFT_79773 Pisolithus tinctorius M404DRAFT_79773 N 0.417
GF12898 Drosophila ananassae FBgn0089932 I 0.417
GA21052 Drosophila pseudoobscura FBgn0081040 I 0.417
Sox15 Drosophila melanogaster FBgn0005613 D 0.417
tetur03g05800 Tetranychus urticae tetur03g05800 I 0.417
MDOA011444 Musca domestica MDOA011444 I 0.417
BBX Homo sapiens ENSG00000114439 D 0.417
ENSDORG00000001450 Dipodomys ordii ENSDORG00000001450 I 0.417
ENSMEUG00000014457 Macropus eugenii ENSMEUG00000014457 I 0.417
PHACADRAFT_58554 Phanerochaete carnosa PHACADRAFT_58554 N 0.417
GL17288 Drosophila persimilis FBgn0154891 I 0.417
GM20225 Drosophila sechellia FBgn0175108 I 0.417
GJ22304 Drosophila virilis FBgn0209417 I 0.417
GG22439 Drosophila erecta FBgn0114611 I 0.417
CGI_10003991 Crassostrea gigas CGI_10003991 I 0.417
GI20453 Drosophila mojavensis FBgn0143189 I 0.417
GE12330 Drosophila yakuba FBgn0230081 I 0.417
GK21748 Drosophila willistoni FBgn0223733 I 0.417
GH20045 Drosophila grimshawi FBgn0127509 I 0.417
CapteG70604 Capitella teleta CapteG70604 I 0.416