CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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YQE_13042
(
Dendroctonus ponderosae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
YQE_13042
T333355_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Sox15
M03973_2.00
Drosophila melanogaster
WYTGTTCGGTD
HACCGAACARW
SELEX
Nitta et al.(2015)
Sox15_1
0.417
0.972
Sox15
M03974_2.00
Drosophila melanogaster
VACAATDNCATTGTN
NACAATGNHATTGTB
SELEX
Nitta et al.(2015)
Sox15_2
0.417
0.972
Sox15
M06450_2.00
Drosophila melanogaster
RWACAATR
YATTGTWY
B1H
Zhu et al.(2011)
Sox15_SANGER_5_FBgn0005613
0.417
0.972
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENN70259
Sox
141
176
IRRPMNAFMVWAKVERKKLADENPDLHNADLSKMLG
Links
Other
Sox
family TFs
Other
Dendroctonus ponderosae
TFs
208 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GB40960
Apis mellifera
GB40960
I
0.741
AARA000827
Anopheles arabiensis
AARA000827
I
0.741
AGAP012033
Anopheles gambiae
AGAP012033
I
0.741
ADIR009659
Anopheles dirus
ADIR009659
I
0.741
SINV16626
Solenopsis invicta
SINV16626
I
0.741
AMEC014560
Anopheles melas
AMEC014560
I
0.741
BGLB002734
Biomphalaria glabrata
BGLB002734
I
0.741
AFUN009319
Anopheles funestus
AFUN009319
I
0.741
ACEP25857
Atta cephalotes
ACEP25857
I
0.741
HMEL016850
Heliconius melpomene
HMEL016850
I
0.741
AAEL000792
Aedes aegypti
AAEL000792
I
0.741
CPIJ012500
Culex quinquefasciatus
CPIJ012500
N
0.735
SMAR010127
Strigamia maritima
SMAR010127
N
0.735
PHUM433270
Pediculus humanus
PHUM433270
N
0.735
CpipJ_CPIJ012500
Culex pipiens
CpipJ_CPIJ012500
N
0.735
RPRC012125
Rhodnius prolixus
RPRC012125
N
0.735
Cflo_01077--XP_001122045.1_APIME
Camponotus floridanus
Cflo_01077--XP_001122045.1_APIME
N
0.735
ACOM026664
Anopheles coluzzii
ACOM026664
N
0.735
ASIS016076
Anopheles sinensis
ASIS016076
N
0.735
LDEC007549
Leptinotarsa decemlineata
LDEC007549
N
0.735
Hsal_04214--XP_001122045.1_APIME
Harpegnathos saltator
Hsal_04214--XP_001122045.1_APIME
N
0.735
KGM_05609
Danaus plexippus
KGM_05609
N
0.735
ACUA011783
Anopheles culicifacies
ACUA011783
N
0.735
Ocbimv22020621m.g
Octopus bimaculoides
Ocbimv22020621m.g
N
0.706
SOX17
Procavia capensis
ENSPCAG00000003188
I
0.701
AMIN008219
Anopheles minimus
AMIN008219
I
0.695
BGIBMGA004367
Bombyx mori
BGIBMGA004367
I
0.695
ACHR009359
Anopheles christyi
ACHR009359
I
0.692
AMAM018985
Anopheles maculatus
AMAM018985
I
0.692
AATE012157
Anopheles atroparvus
AATE012157
N
0.688
ASTEI06129
Anopheles stephensi
ASTEI06129
N
0.686
AEPI007946
Anopheles epiroticus
AEPI007946
N
0.686
L798_02392
Zootermopsis nevadensis
L798_02392
I
0.679
ACEP10855
Atta cephalotes
ACEP10855
I
0.667
PPAI008595
Phlebotomus papatasi
PPAI008595
N
0.666
ASTEI06407
Anopheles stephensi
ASTEI06407
I
0.663
ACOM022800
Anopheles coluzzii
ACOM022800
I
0.663
AMEC012053
Anopheles melas
AMEC012053
I
0.663
LLOJ005525
Lutzomyia longipalpis
LLOJ005525
I
0.663
LCUP001585
Lucilia cuprina
LCUP001585
I
0.663
AEPI003628
Anopheles epiroticus
AEPI003628
I
0.663
BGIBMGA003080
Bombyx mori
BGIBMGA003080
I
0.663
AARA005391
Anopheles arabiensis
AARA005391
I
0.663
AMIN009301
Anopheles minimus
AMIN009301
I
0.663
AMEM014190
Anopheles merus
AMEM014190
I
0.663
SOX9
Dasypus novemcinctus
ENSDNOG00000033826
I
0.663
ENSTTRG00000005878
Tursiops truncatus
ENSTTRG00000005878
I
0.662
ENSPSIG00000009504
Pelodiscus sinensis
ENSPSIG00000009504
I
0.659
CPIJ012042
Culex quinquefasciatus
CPIJ012042
I
0.656
ACUA008554
Anopheles culicifacies
ACUA008554
I
0.656
MCINX002905
Melitaea cinxia
MCINX002905
I
0.656
MESCA000459
Megaselia scalaris
MESCA000459
I
0.656
AQUA001262
Anopheles quadriannulatus
AQUA001262
I
0.656
AALB009868
Anopheles albimanus
AALB009868
I
0.656
ADIR005630
Anopheles dirus
ADIR005630
I
0.656
CpipJ_CPIJ012042
Culex pipiens
CpipJ_CPIJ012042
I
0.656
AMAM006332
Anopheles maculatus
AMAM006332
I
0.656
AFAF017335
Anopheles farauti
AFAF017335
I
0.642
TC009854
Tribolium castaneum
TC009854
I
0.635
SOX9
Pteropus vampyrus
ENSPVAG00000010505
I
0.623
ENSDORG00000012440
Dipodomys ordii
ENSDORG00000012440
I
0.623
ENSVPAG00000000908
Vicugna pacos
ENSVPAG00000000908
I
0.623
SOX10
Ochotona princeps
ENSOPRG00000013575
I
0.623
SOX10
Procavia capensis
ENSPCAG00000005913
I
0.623
SOX10
Erinaceus europaeus
ENSEEUG00000011263
I
0.623
ENSDORG00000003967
Dipodomys ordii
ENSDORG00000003967
I
0.623
SINV19753
Solenopsis invicta
SINV19753
I
0.621
LotgiG88815
Lottia gigantea
LotgiG88815
I
0.621
BGLB010904
Biomphalaria glabrata
BGLB010904
I
0.621
ISCW009925
Ixodes scapularis
ISCW009925
I
0.620
ENSPMAG00000010371
Petromyzon marinus
ENSPMAG00000010371
I
0.620
AFUN010199
Anopheles funestus
AFUN010199
I
0.616
NBR_0002216901
Nippostrongylus brasiliensis
NBR_0002216901
I
0.615
NBR_0000360901
Nippostrongylus brasiliensis
NBR_0000360901
I
0.615
Hsal_04828--XP_001122993.1_APIME
Harpegnathos saltator
Hsal_04828--XP_001122993.1_APIME
I
0.614
RPRC012780
Rhodnius prolixus
RPRC012780
I
0.614
ENSFALG00000002572
Ficedula albicollis
ENSFALG00000002572
I
0.614
XP_002935939
Xenopus tropicalis
XP_002935939
I
0.614
sox9b
Danio rerio
ENSDARG00000043923
I
0.614
TC003791
Tribolium castaneum
TC003791
I
0.614
ANCDUO_25812
Ancylostoma duodenale
ANCDUO_25812
N
0.608
SOX12
Sus scrofa
ENSSSCG00000021920
I
0.608
CLEC006961
Cimex lectularius
CLEC006961
I
0.607
SOX13
Felis catus
ENSFCAG00000002900
I
0.605
ENSTGUG00000002931
Taeniopygia guttata
ENSTGUG00000002931
I
0.605
TCLT_0000083701
Thelazia callipaeda
TCLT_0000083701
I
0.598
ENSTSYG00000012536
Tarsius syrichta
ENSTSYG00000012536
I
0.598
ENSMEUG00000008151
Macropus eugenii
ENSMEUG00000008151
I
0.598
SOX6
Echinops telfairi
ENSETEG00000001898
I
0.598
SOX6
Erinaceus europaeus
ENSEEUG00000006749
I
0.598
SOX6
Choloepus hoffmanni
ENSCHOG00000005751
I
0.598
SOX6
Procavia capensis
ENSPCAG00000001398
N
0.598
SOX13
Microcebus murinus
ENSMICG00000009236
I
0.598
SOX5
Sorex araneus
ENSSARG00000007963
I
0.598
SOX6
Tupaia belangeri
ENSTBEG00000002476
I
0.598
SOX10
Meleagris gallopavo
ENSMGAG00000012508
I
0.576
Gfo_R009506
Geospiza fortis
Gfo_R009506
I
0.576
D918_08316
Trichuris suis
D918_08316
N
0.575
ENSPTRG00000005969
Pan troglodytes
ENSPTRG00000005969
I
0.567
SOX1
Anolis carolinensis
ENSACAG00000006346
I
0.567
CpipJ_CPIJ014424
Culex pipiens
CpipJ_CPIJ014424
I
0.560
CPIJ014424
Culex quinquefasciatus
CPIJ014424
I
0.560
ENSCPOG00000024750
Cavia porcellus
ENSCPOG00000024750
I
0.559
ACAC_0000143401
Angiostrongylus cantonensis
ACAC_0000143401
N
0.553
RPRC014334
Rhodnius prolixus
RPRC014334
I
0.548
SINV19744
Solenopsis invicta
SINV19744
I
0.548
CLEC006959
Cimex lectularius
CLEC006959
I
0.548
ENSOARG00000009998
Ovis aries
ENSOARG00000009998
I
0.548
ACEP10859
Atta cephalotes
ACEP10859
I
0.548
SOX3
Pteropus vampyrus
ENSPVAG00000003166
I
0.548
AMEC016085
Anopheles melas
AMEC016085
I
0.547
ACUA026266
Anopheles culicifacies
ACUA026266
I
0.547
AQUA004309
Anopheles quadriannulatus
AQUA004309
I
0.547
ML23337a
Mnemiopsis leidyi
ML23337a
N
0.545
ACUA026638
Anopheles culicifacies
ACUA026638
I
0.543
AARA005393
Anopheles arabiensis
AARA005393
I
0.543
AALB009865
Anopheles albimanus
AALB009865
I
0.543
ADIR005633
Anopheles dirus
ADIR005633
I
0.543
AEPI010515
Anopheles epiroticus
AEPI010515
I
0.543
AMIN009304
Anopheles minimus
AMIN009304
I
0.543
AMEC008804
Anopheles melas
AMEC008804
I
0.543
MESCA009852
Megaselia scalaris
MESCA009852
I
0.543
AFUN010196
Anopheles funestus
AFUN010196
I
0.543
PPAI009257
Phlebotomus papatasi
PPAI009257
N
0.542
ACOM034662
Anopheles coluzzii
ACOM034662
I
0.541
AMIN001219
Anopheles minimus
AMIN001219
I
0.541
AARA011914
Anopheles arabiensis
AARA011914
I
0.541
ENSMEUG00000015665
Macropus eugenii
ENSMEUG00000015665
I
0.537
L798_09360
Zootermopsis nevadensis
L798_09360
N
0.530
AATE006542
Anopheles atroparvus
AATE006542
N
0.522
CPIJ014016
Culex quinquefasciatus
CPIJ014016
N
0.522
CpipJ_CPIJ014016
Culex pipiens
CpipJ_CPIJ014016
N
0.522
L798_12045
Zootermopsis nevadensis
L798_12045
I
0.521
L798_04020
Zootermopsis nevadensis
L798_04020
N
0.520
nDi.2.2.2.g10379
Dirofilaria immitis
nDi.2.2.2.g10379
I
0.518
CpipJ_CPIJ017659
Culex pipiens
CpipJ_CPIJ017659
I
0.516
CPIJ017659
Culex quinquefasciatus
CPIJ017659
I
0.516
L898_g3197
Steinernema monticolum
L898_g3197
I
0.515
WUBG_09252
Wuchereria bancrofti
WUBG_09252
I
0.511
nLs.2.1.2.g10155
Litomosoides sigmodontis
nLs.2.1.2.g10155
I
0.511
SEPMUDRAFT_152382
Sphaerulina musiva
SEPMUDRAFT_152382
N
0.509
ANCCAN_22368
Ancylostoma caninum
ANCCAN_22368
N
0.509
ACEP25270
Atta cephalotes
ACEP25270
N
0.506
ENSNLEG00000009528
Nomascus leucogenys
ENSNLEG00000009528
I
0.496
genemark-nMf.1.1.scaf16788-processed-gene-0.1
Meloidogyne floridensis
genemark-nMf.1.1.scaf16788-processed-gene-0.1
I
0.489
GLOINDRAFT_28614
Rhizophagus irregularis
GLOINDRAFT_28614
N
0.488
HelroG148277
Helobdella robusta
HelroG148277
N
0.485
YQE_08560
Dendroctonus ponderosae
YQE_08560
I
0.483
ENSAMXG00000007582
Astyanax mexicanus
ENSAMXG00000007582
I
0.479
AEPI007651
Anopheles epiroticus
AEPI007651
N
0.478
AMAM022760
Anopheles maculatus
AMAM022760
N
0.478
SPER_0000213401
Spirometra erinaceieuropaei
SPER_0000213401
N
0.476
AMAM015893
Anopheles maculatus
AMAM015893
I
0.475
DAPPUDRAFT_346928
Daphnia pulex
DAPPUDRAFT_346928
N
0.473
ENSNLEG00000010228
Nomascus leucogenys
ENSNLEG00000010228
I
0.463
GLYMA01G28253
Glycine max
GLYMA01G28253
N
0.458
RSKR_0000394100
Rhabditophanes kr3021
RSKR_0000394100
N
0.456
SOX30
Procavia capensis
ENSPCAG00000010619
N
0.450
LotgiG120517
Lottia gigantea
LotgiG120517
I
0.450
PEQ_0000771101
Parascaris equorum
PEQ_0000771101
I
0.446
MCINX011114
Melitaea cinxia
MCINX011114
I
0.445
ACYPI006194
Acyrthosiphon pisum
ACYPI006194
I
0.445
DAPPUDRAFT_35405
Daphnia pulex
DAPPUDRAFT_35405
I
0.445
NV15963
Nasonia vitripennis
NV15963
I
0.445
augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0
N
0.444
MPER_07337
Moniliophthora perniciosa
MPER_07337
N
0.443
ENSDNOG00000034433
Dasypus novemcinctus
ENSDNOG00000034433
N
0.443
XM_002306945.1
Populus trichocarpa
POPTR_0005s27390
I
0.441
SOX11
Ornithorhynchus anatinus
ENSOANG00000006361
N
0.437
orange1.1g029982m.g
Citrus sinensis
orange1.1g029982m.g
I
0.437
HBP1
Homo sapiens
ENSG00000105856
D
0.437
PXEA_0001829801
Protopolystoma xenopodis
PXEA_0001829801
N
0.437
GRMZM2G144398
Zea mays
GRMZM2G144398
N
0.436
NEMVEDRAFT_v1g163545
Nematostella vectensis
NEMVEDRAFT_v1g163545
I
0.435
GLOINDRAFT_339213
Rhizophagus irregularis
GLOINDRAFT_339213
N
0.435
NECAME_14932
Necator americanus
NECAME_14932
N
0.434
GRMZM2G150348
Zea mays
GRMZM2G150348
N
0.433
SPU_021407
Strongylocentrotus purpuratus
SPU_021407
N
0.431
AQUA001259
Anopheles quadriannulatus
AQUA001259
I
0.431
ACOM022803
Anopheles coluzzii
ACOM022803
I
0.431
AMEM010579
Anopheles merus
AMEM010579
I
0.431
ENSAMEG00000016773
Ailuropoda melanoleuca
ENSAMEG00000016773
I
0.431
ENSCSAVG00000000494
Ciona savignyi
ENSCSAVG00000000494
I
0.431
AGAP010923
Anopheles gambiae
AGAP010923
I
0.431
OESDEN_18796
Oesophagostomum dentatum
OESDEN_18796
N
0.428
ANCDUO_17471
Ancylostoma duodenale
ANCDUO_17471
I
0.423
CGOC_0001130501
Cylicostephanus goldi
CGOC_0001130501
I
0.420
CY34DRAFT_106474
Suillus luteus
CY34DRAFT_106474
N
0.418
M404DRAFT_79773
Pisolithus tinctorius
M404DRAFT_79773
N
0.417
GF12898
Drosophila ananassae
FBgn0089932
I
0.417
GA21052
Drosophila pseudoobscura
FBgn0081040
I
0.417
Sox15
Drosophila melanogaster
FBgn0005613
D
0.417
tetur03g05800
Tetranychus urticae
tetur03g05800
I
0.417
MDOA011444
Musca domestica
MDOA011444
I
0.417
BBX
Homo sapiens
ENSG00000114439
D
0.417
ENSDORG00000001450
Dipodomys ordii
ENSDORG00000001450
I
0.417
ENSMEUG00000014457
Macropus eugenii
ENSMEUG00000014457
I
0.417
PHACADRAFT_58554
Phanerochaete carnosa
PHACADRAFT_58554
N
0.417
GL17288
Drosophila persimilis
FBgn0154891
I
0.417
GM20225
Drosophila sechellia
FBgn0175108
I
0.417
GJ22304
Drosophila virilis
FBgn0209417
I
0.417
GG22439
Drosophila erecta
FBgn0114611
I
0.417
CGI_10003991
Crassostrea gigas
CGI_10003991
I
0.417
GI20453
Drosophila mojavensis
FBgn0143189
I
0.417
GE12330
Drosophila yakuba
FBgn0230081
I
0.417
GK21748
Drosophila willistoni
FBgn0223733
I
0.417
GH20045
Drosophila grimshawi
FBgn0127509
I
0.417
CapteG70604
Capitella teleta
CapteG70604
I
0.416