CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PXEA_0001829801
(
Protopolystoma xenopodis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
PXEA_0001829801
T336844_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PXEA_0001829801-mRNA-1
Sox
90
113
IKRPMNAFMVWAREERRKILKVSF
Links
Other
Sox
family TFs
Other
Protopolystoma xenopodis
TFs
93 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sjc_0095610
Schistosoma japonicum
Sjc_0095610
N
0.683
SOX11
Ornithorhynchus anatinus
ENSOANG00000006361
N
0.650
PredSwiss_ASS2010_3146.2
Pneumocystis carinii
PredSwiss_ASS2010_3146.2
N
0.594
DAPPUDRAFT_346928
Daphnia pulex
DAPPUDRAFT_346928
N
0.573
ENSCPOG00000024750
Cavia porcellus
ENSCPOG00000024750
I
0.554
PPA10381
Pristionchus pacificus
PPA10381
N
0.540
ENSTNIG00000011238
Tetraodon nigroviridis
ENSTNIG00000011238
N
0.525
CaO19.9298
Candida albicans
CaO19.9298
N
0.523
CaO19.1730
Candida albicans
CaO19.1730
N
0.523
e_gw1.88.21.1
Fragilariopsis cylindrus
e_gw1.88.21.1
N
0.501
SPOG_05006
Schizosaccharomyces cryophilus
SPOG_05006
N
0.501
RO3G_14677
Rhizopus oryzae
RO3G_14677
N
0.488
SOX6
Echinops telfairi
ENSETEG00000001898
I
0.486
SOX6
Erinaceus europaeus
ENSEEUG00000006749
I
0.486
SOX6
Procavia capensis
ENSPCAG00000001398
N
0.486
TCLT_0000083701
Thelazia callipaeda
TCLT_0000083701
I
0.486
ENSMEUG00000008151
Macropus eugenii
ENSMEUG00000008151
I
0.486
SOX13
Microcebus murinus
ENSMICG00000009236
I
0.486
SOX5
Sorex araneus
ENSSARG00000007963
I
0.486
ENSTSYG00000012536
Tarsius syrichta
ENSTSYG00000012536
I
0.486
SOX6
Choloepus hoffmanni
ENSCHOG00000005751
I
0.486
SOX6
Tupaia belangeri
ENSTBEG00000002476
I
0.486
ENSTGUG00000002931
Taeniopygia guttata
ENSTGUG00000002931
I
0.480
SOX13
Felis catus
ENSFCAG00000002900
I
0.480
GLYMA03G08270
Glycine max
GLYMA03G08270
I
0.480
HBP1
Sorex araneus
ENSSARG00000007731
I
0.472
ENSMEUG00000011116
Macropus eugenii
ENSMEUG00000011116
I
0.472
HBP1
Echinops telfairi
ENSETEG00000018542
I
0.472
Hbp1
Dipodomys ordii
ENSDORG00000010576
I
0.472
Ogr19131
Ophisaurus gracilis
Ogr19131
N
0.462
HBP1
Homo sapiens
ENSG00000105856
D
0.462
Hbp1
Mus musculus
ENSMUSG00000002996
D
0.462
GH23191
Drosophila grimshawi
FBgn0130648
N
0.462
MESCA000459
Megaselia scalaris
MESCA000459
I
0.461
ADIR005630
Anopheles dirus
ADIR005630
I
0.461
ANCDUO_25812
Ancylostoma duodenale
ANCDUO_25812
N
0.461
Minc03634
Meloidogyne incognita
Minc03634
N
0.456
Ocbimv22007316m.g
Octopus bimaculoides
Ocbimv22007316m.g
N
0.456
Minc04648
Meloidogyne incognita
Minc04648
N
0.456
NBR_0002216901
Nippostrongylus brasiliensis
NBR_0002216901
I
0.454
ASTEI06407
Anopheles stephensi
ASTEI06407
I
0.454
NBR_0000360901
Nippostrongylus brasiliensis
NBR_0000360901
I
0.454
LLOJ005525
Lutzomyia longipalpis
LLOJ005525
I
0.454
LCUP001585
Lucilia cuprina
LCUP001585
I
0.454
ACOM022800
Anopheles coluzzii
ACOM022800
I
0.454
AMAM006332
Anopheles maculatus
AMAM006332
I
0.454
ACUA008554
Anopheles culicifacies
ACUA008554
I
0.454
AEPI003628
Anopheles epiroticus
AEPI003628
I
0.454
AMEC012053
Anopheles melas
AMEC012053
I
0.454
AMEM014190
Anopheles merus
AMEM014190
I
0.454
AQUA001262
Anopheles quadriannulatus
AQUA001262
I
0.454
AARA005391
Anopheles arabiensis
AARA005391
I
0.454
AMIN009301
Anopheles minimus
AMIN009301
I
0.454
AALB009868
Anopheles albimanus
AALB009868
I
0.454
MCINX002905
Melitaea cinxia
MCINX002905
I
0.454
SOX12
Sus scrofa
ENSSSCG00000021920
I
0.454
CPIJ012042
Culex quinquefasciatus
CPIJ012042
I
0.454
BGIBMGA003080
Bombyx mori
BGIBMGA003080
I
0.454
CpipJ_CPIJ012042
Culex pipiens
CpipJ_CPIJ012042
I
0.454
ACEP10855
Atta cephalotes
ACEP10855
I
0.454
Bra012244
Brassica rapa
Bra012244
N
0.452
Bra016455
Brassica rapa
Bra016455
N
0.452
D918_08316
Trichuris suis
D918_08316
N
0.450
GLYMA02G25940
Glycine max
GLYMA02G25940
N
0.444
SOX17
Procavia capensis
ENSPCAG00000003188
I
0.444
ENSGMOG00000014613
Gadus morhua
ENSGMOG00000014613
N
0.444
SMAR010127
Strigamia maritima
SMAR010127
N
0.444
Ocbimv22020621m.g
Octopus bimaculoides
Ocbimv22020621m.g
N
0.444
SOX9
Dasypus novemcinctus
ENSDNOG00000033826
I
0.443
AMEC014560
Anopheles melas
AMEC014560
I
0.437
CPIJ012500
Culex quinquefasciatus
CPIJ012500
N
0.437
BGLB002734
Biomphalaria glabrata
BGLB002734
I
0.437
CpipJ_CPIJ012500
Culex pipiens
CpipJ_CPIJ012500
N
0.437
AAEL000792
Aedes aegypti
AAEL000792
I
0.437
ACEP25857
Atta cephalotes
ACEP25857
I
0.437
AGAP012033
Anopheles gambiae
AGAP012033
I
0.437
ASIS016076
Anopheles sinensis
ASIS016076
N
0.437
ACUA011783
Anopheles culicifacies
ACUA011783
N
0.437
LDEC007549
Leptinotarsa decemlineata
LDEC007549
N
0.437
PHUM433270
Pediculus humanus
PHUM433270
N
0.437
RPRC012125
Rhodnius prolixus
RPRC012125
N
0.437
SINV16626
Solenopsis invicta
SINV16626
I
0.437
Hsal_04214--XP_001122045.1_APIME
Harpegnathos saltator
Hsal_04214--XP_001122045.1_APIME
N
0.437
YQE_13042
Dendroctonus ponderosae
YQE_13042
I
0.437
KGM_05609
Danaus plexippus
KGM_05609
N
0.437
HMEL016850
Heliconius melpomene
HMEL016850
I
0.437
Cflo_01077--XP_001122045.1_APIME
Camponotus floridanus
Cflo_01077--XP_001122045.1_APIME
N
0.437
ADIR009659
Anopheles dirus
ADIR009659
I
0.437
ACOM026664
Anopheles coluzzii
ACOM026664
N
0.437
GB40960
Apis mellifera
GB40960
I
0.437
AFUN009319
Anopheles funestus
AFUN009319
I
0.437
AARA000827
Anopheles arabiensis
AARA000827
I
0.437
GRMZM2G150348
Zea mays
GRMZM2G150348
N
0.420