GRMZM2G144398 (Zea mays)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GRMZM2G144398 T330334_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G144398_P01 Sox 289 324

Links

Other Sox family TFs
Other Zea mays TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I 0.705
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.695
AC186524.3_FG005 Zea mays AC186524.3_FG005 N 0.618
Traes_6DL_F46673879 Triticum aestivum Traes_6DL_F46673879 N 0.574
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.568
Bra012244 Brassica rapa Bra012244 N 0.537
Bra016455 Brassica rapa Bra016455 N 0.537
GLYMA01G28253 Glycine max GLYMA01G28253 N 0.526
Si007288m.g Setaria italica Si007288m.g I 0.518
BRADI1G29730 Brachypodium distachyon BRADI1G29730 I 0.518
GRMZM5G834758 Zea mays GRMZM5G834758 I 0.518
Aquca_004_00335 Aquilegia coerulea Aquca_004_00335 I 0.518
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.515
GLYMA01G28820 Glycine max GLYMA01G28820 I 0.515
GLYMA16G22060 Glycine max GLYMA16G22060 I 0.513
L798_09360 Zootermopsis nevadensis L798_09360 N 0.510
L798_04020 Zootermopsis nevadensis L798_04020 N 0.510
SapurV1A.0491s0160 Salix purpurea SapurV1A.0491s0160 N 0.509
Pavir.Ba01379 Panicum virgatum Pavir.Ba01379 I 0.501
PRUPE_ppa011596mg Prunus persica PRUPE_ppa011596mg I 0.495
GRMZM2G150348 Zea mays GRMZM2G150348 N 0.494
OESDEN_18796 Oesophagostomum dentatum OESDEN_18796 N 0.491
GRMZM2G324727 Zea mays GRMZM2G324727 N 0.489
SapurV1A.2780s0020 Salix purpurea SapurV1A.2780s0020 I 0.487
PK25712.1 Cannabis sativa PK25712.1 N 0.477
Traes_1DL_ED7FDC748 Triticum aestivum Traes_1DL_ED7FDC748 N 0.474
TCM_042534 Theobroma cacao TCM_042534 I 0.473
HBP1 Homo sapiens ENSG00000105856 D 0.472
Cucsa.047620 Cucumis sativus Cucsa.047620 N 0.470
GLYMA02G25940 Glycine max GLYMA02G25940 N 0.469
MTR_8g018100 Medicago truncatula MTR_8g018100 N 0.468
PK14705.1 Cannabis sativa PK14705.1 I 0.467
GPUH_0000691201 Gongylonema pulchrum GPUH_0000691201 N 0.465
GPUH_0001196001 Gongylonema pulchrum GPUH_0001196001 N 0.465
GLOINDRAFT_28614 Rhizophagus irregularis GLOINDRAFT_28614 N 0.455
PGSC0003DMG400008501 Solanum tuberosum PGSC0003DMG400008501 I 0.451
SOX17 Procavia capensis ENSPCAG00000003188 I 0.448
ANCDUO_25812 Ancylostoma duodenale ANCDUO_25812 N 0.443
orange1.1g030283m.g Citrus sinensis orange1.1g030283m.g I 0.443
SMAR010127 Strigamia maritima SMAR010127 N 0.443
Ocbimv22020621m.g Octopus bimaculoides Ocbimv22020621m.g N 0.443
SOX12 Sus scrofa ENSSSCG00000021920 I 0.441
SOX9 Dasypus novemcinctus ENSDNOG00000033826 I 0.441
Si018635m.g Setaria italica Si018635m.g N 0.439
Sb04g032180 Sorghum bicolor Sb04g032180 N 0.439
GRMZM2G156785 Zea mays GRMZM2G156785 N 0.439
MPER_07337 Moniliophthora perniciosa MPER_07337 N 0.438
PHACADRAFT_58554 Phanerochaete carnosa PHACADRAFT_58554 N 0.438
M404DRAFT_79773 Pisolithus tinctorius M404DRAFT_79773 N 0.438
PPA10381 Pristionchus pacificus PPA10381 N 0.437
Cflo_01077--XP_001122045.1_APIME Camponotus floridanus Cflo_01077--XP_001122045.1_APIME N 0.436
Hsal_04214--XP_001122045.1_APIME Harpegnathos saltator Hsal_04214--XP_001122045.1_APIME N 0.436
RSKR_0000394100 Rhabditophanes kr3021 RSKR_0000394100 N 0.436
SINV16626 Solenopsis invicta SINV16626 I 0.436
PHUM433270 Pediculus humanus PHUM433270 N 0.436
RPRC012125 Rhodnius prolixus RPRC012125 N 0.436
GB40960 Apis mellifera GB40960 I 0.436
HMEL016850 Heliconius melpomene HMEL016850 I 0.436
YQE_13042 Dendroctonus ponderosae YQE_13042 I 0.436
LDEC007549 Leptinotarsa decemlineata LDEC007549 N 0.436
ADIR009659 Anopheles dirus ADIR009659 I 0.436
AFUN009319 Anopheles funestus AFUN009319 I 0.436
AMEC014560 Anopheles melas AMEC014560 I 0.436
ASIS016076 Anopheles sinensis ASIS016076 N 0.436
ACUA011783 Anopheles culicifacies ACUA011783 N 0.436
ACOM026664 Anopheles coluzzii ACOM026664 N 0.436
ACEP25857 Atta cephalotes ACEP25857 I 0.436
AAEL000792 Aedes aegypti AAEL000792 I 0.436
CpipJ_CPIJ012500 Culex pipiens CpipJ_CPIJ012500 N 0.436
AARA000827 Anopheles arabiensis AARA000827 I 0.436
AGAP012033 Anopheles gambiae AGAP012033 I 0.436
CPIJ012500 Culex quinquefasciatus CPIJ012500 N 0.436
NBR_0000360901 Nippostrongylus brasiliensis NBR_0000360901 I 0.436
KGM_05609 Danaus plexippus KGM_05609 N 0.436
BGLB002734 Biomphalaria glabrata BGLB002734 I 0.436
NBR_0002216901 Nippostrongylus brasiliensis NBR_0002216901 I 0.436
ENSGMOG00000014613 Gadus morhua ENSGMOG00000014613 N 0.435
OGLUM02G27900 Oryza glumaepatula OGLUM02G27900 N 0.434
OB02G34710 Oryza brachyantha OB02G34710 N 0.434
BRADI3G51140 Brachypodium distachyon BRADI3G51140 N 0.434
ONIVA02G29880 Oryza nivara ONIVA02G29880 N 0.434
OPUNC02G25020 Oryza punctata OPUNC02G25020 N 0.434
OMERI02G26620 Oryza meridionalis OMERI02G26620 N 0.434
OBART02G27340 Oryza barthii OBART02G27340 N 0.434
OS02G0670400 Oryza sativa OS02G0670400 N 0.434
BGIOSGA008782 Oryza indica BGIOSGA008782 N 0.434
GRMZM2G013821 Zea mays GRMZM2G013821 N 0.434
LPERR02G22240 Leersia perrieri LPERR02G22240 N 0.434
ORUFI02G28820 Oryza rufipogon ORUFI02G28820 N 0.434
SOX6 Erinaceus europaeus ENSEEUG00000006749 I 0.433
0600010013 Ostreococcus tauri 0600010013 I 0.433
SOX13 Microcebus murinus ENSMICG00000009236 I 0.433
ENSMEUG00000008151 Macropus eugenii ENSMEUG00000008151 I 0.433
ADIR005630 Anopheles dirus ADIR005630 I 0.433
MESCA000459 Megaselia scalaris MESCA000459 I 0.433
TCLT_0000083701 Thelazia callipaeda TCLT_0000083701 I 0.433
SOX6 Procavia capensis ENSPCAG00000001398 N 0.433
SOX5 Sorex araneus ENSSARG00000007963 I 0.433
SOX6 Echinops telfairi ENSETEG00000001898 I 0.433
ENSTSYG00000012536 Tarsius syrichta ENSTSYG00000012536 I 0.433
SOX6 Choloepus hoffmanni ENSCHOG00000005751 I 0.433
SOX6 Tupaia belangeri ENSTBEG00000002476 I 0.433
Gorai.001G198900 Gossypium raimondii Gorai.001G198900 I 0.428
Gorai.013G018500 Gossypium raimondii Gorai.013G018500 I 0.428
OS04G0564600 Oryza sativa OS04G0564600 N 0.428
AMAM006332 Anopheles maculatus AMAM006332 I 0.426
AEPI003628 Anopheles epiroticus AEPI003628 I 0.426
AMEM014190 Anopheles merus AMEM014190 I 0.426
CpipJ_CPIJ012042 Culex pipiens CpipJ_CPIJ012042 I 0.426
ASTEI06407 Anopheles stephensi ASTEI06407 I 0.426
AQUA001262 Anopheles quadriannulatus AQUA001262 I 0.426
AMIN009301 Anopheles minimus AMIN009301 I 0.426
MCINX002905 Melitaea cinxia MCINX002905 I 0.426
AMEC012053 Anopheles melas AMEC012053 I 0.426
ACOM022800 Anopheles coluzzii ACOM022800 I 0.426
LCUP001585 Lucilia cuprina LCUP001585 I 0.426
SOX13 Felis catus ENSFCAG00000002900 I 0.426
ACEP10855 Atta cephalotes ACEP10855 I 0.426
Gorai.007G078500 Gossypium raimondii Gorai.007G078500 N 0.426
BGIBMGA003080 Bombyx mori BGIBMGA003080 I 0.426
LLOJ005525 Lutzomyia longipalpis LLOJ005525 I 0.426
CPIJ012042 Culex quinquefasciatus CPIJ012042 I 0.426
AARA005391 Anopheles arabiensis AARA005391 I 0.426
ACUA008554 Anopheles culicifacies ACUA008554 I 0.426
AALB009868 Anopheles albimanus AALB009868 I 0.426
ENSTGUG00000002931 Taeniopygia guttata ENSTGUG00000002931 I 0.426
PEQ_0000212901 Parascaris equorum PEQ_0000212901 N 0.424
ORGLA04G0188600 Oryza glaberrima ORGLA04G0188600 N 0.421
OB04G28810 Oryza brachyantha OB04G28810 N 0.421
MPER_04184 Moniliophthora perniciosa MPER_04184 N 0.421
BGIOSGA016928 Oryza indica BGIOSGA016928 N 0.421
OBART04G21800 Oryza barthii OBART04G21800 N 0.421
OGLUM04G21840 Oryza glumaepatula OGLUM04G21840 N 0.421
OPUNC04G19550 Oryza punctata OPUNC04G19550 N 0.421
ORUFI04G23400 Oryza rufipogon ORUFI04G23400 N 0.421
ONIVA04G20340 Oryza nivara ONIVA04G20340 N 0.421
OMERI04G18350 Oryza meridionalis OMERI04G18350 N 0.421
ACEP25270 Atta cephalotes ACEP25270 N 0.416