SapurV1A.0491s0160 (Salix purpurea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SapurV1A.0491s0160 T334710_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0491s0160.1.p Sox 39 83

Links

Other Sox family TFs
Other Salix purpurea TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_004_00335 Aquilegia coerulea Aquca_004_00335 I 0.627
Traes_1DL_ED7FDC748 Triticum aestivum Traes_1DL_ED7FDC748 N 0.613
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.613
PRUPE_ppa011596mg Prunus persica PRUPE_ppa011596mg I 0.597
GRMZM5G834758 Zea mays GRMZM5G834758 I 0.569
Si007288m.g Setaria italica Si007288m.g I 0.569
BRADI1G29730 Brachypodium distachyon BRADI1G29730 I 0.569
GLYMA01G28820 Glycine max GLYMA01G28820 I 0.566
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.566
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.564
GLYMA16G22060 Glycine max GLYMA16G22060 I 0.558
Pavir.Ba01379 Panicum virgatum Pavir.Ba01379 I 0.552
SapurV1A.2780s0020 Salix purpurea SapurV1A.2780s0020 I 0.538
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I 0.535
TCM_042534 Theobroma cacao TCM_042534 I 0.524
MTR_8g018100 Medicago truncatula MTR_8g018100 N 0.514
PK14705.1 Cannabis sativa PK14705.1 I 0.512
GRMZM2G144398 Zea mays GRMZM2G144398 N 0.509
PGSC0003DMG400008501 Solanum tuberosum PGSC0003DMG400008501 I 0.502
Traes_6DL_F46673879 Triticum aestivum Traes_6DL_F46673879 N 0.498
orange1.1g030283m.g Citrus sinensis orange1.1g030283m.g I 0.493
Bra012244 Brassica rapa Bra012244 N 0.493
Bra016455 Brassica rapa Bra016455 N 0.493
Gorai.001G198900 Gossypium raimondii Gorai.001G198900 I 0.483
Gorai.013G018500 Gossypium raimondii Gorai.013G018500 I 0.473
TCM_018380 Theobroma cacao TCM_018380 I 0.462
PDK_20s1709771g002 Phoenix dactylifera PDK_20s1709771g002 N 0.460
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I 0.456
TRIUR3_35367 Triticum urartu TRIUR3_35367 I 0.451
Traes_7AL_959534EDB Triticum aestivum Traes_7AL_959534EDB I 0.451
Traes_7BL_871FCAF2F Triticum aestivum Traes_7BL_871FCAF2F I 0.451
Traes_7DL_824BFE90C Triticum aestivum Traes_7DL_824BFE90C I 0.451
MLOC_77667 Hordeum vulgare MLOC_77667 I 0.449
AC186524.3_FG005 Zea mays AC186524.3_FG005 N 0.448
mgf012563m Mimulus guttatus mgf012563m I 0.447
BRADI3G12920 Brachypodium distachyon BRADI3G12920 I 0.434
GLYMA02G25940 Glycine max GLYMA02G25940 N 0.433
Eucgr.J02535 Eucalyptus grandis Eucgr.J02535 I 0.431
GRMZM2G024247 Zea mays GRMZM2G024247 N 0.430
WUBG_06999 Wuchereria bancrofti WUBG_06999 N 0.425
LOAG_08062 Loa loa LOAG_08062 N 0.425
GLYMA01G28253 Glycine max GLYMA01G28253 N 0.423
BGIOSGA023639 Oryza indica BGIOSGA023639 I 0.421