0600010013 (Ostreococcus tauri)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 0600010013 T335130_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CRC
M07266_2.00 		Arabidopsis thaliana
TWATCATW
WATGATWA		 Dap-seq
OMalley et al.(2016)
CRC_col_a 		0.417 0.263
CRC
M07267_2.00 		Arabidopsis thaliana
GGTTAGTGTTTTGGAGTCGAATATGACTTG
CAAGTCATATTCGACTCCAAAACACTAACC		 Dap-seq
OMalley et al.(2016)
CRC_colamp_a 		0.417 0.263
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
0600010013 Sox 26 63

Links

Other Sox family TFs
Other Ostreococcus tauri TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
23225_YPR052C Saccharomyces paradoxus 23225_YPR052C I 0.489
CBN04053 Caenorhabditis brenneri CBN04053 N 0.475
SapurV1A.0248s0170 Salix purpurea SapurV1A.0248s0170 I 0.473
Traes_3AL_730255B9F Triticum aestivum Traes_3AL_730255B9F I 0.473
ALUE_0001190701 Ascaris lumbricoides ALUE_0001190701 N 0.464
OSTLU_31946 Ostreococcus lucimarinus OSTLU_31946 I 0.446
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I 0.445
GLYMA12G31670 Glycine max GLYMA12G31670 I 0.444
Eucgr.J00587 Eucalyptus grandis Eucgr.J00587 I 0.444
Cla005767 Citrullus lanatus Cla005767 I 0.444
orange1.1g046045m.g Citrus sinensis orange1.1g046045m.g I 0.444
BGLB013489 Biomphalaria glabrata BGLB013489 N 0.442
ASIS014204 Anopheles sinensis ASIS014204 N 0.442
PEQ_0000212901 Parascaris equorum PEQ_0000212901 N 0.442
H101_08199 Trichophyton interdigitale H101_08199 N 0.440
RSKR_0000394100 Rhabditophanes kr3021 RSKR_0000394100 N 0.440
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I 0.433
GRMZM2G144398 Zea mays GRMZM2G144398 N 0.433
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.433
Ciclev10033714m.g Citrus clementina Ciclev10033714m.g I 0.433
GLYMA01G03580 Glycine max GLYMA01G03580 I 0.433
GLYMA04G10125 Glycine max GLYMA04G10125 I 0.433
TCNE_0000520101 Toxocara canis TCNE_0000520101 N 0.426
OESDEN_18796 Oesophagostomum dentatum OESDEN_18796 N 0.425
ACAC_0000798501 Angiostrongylus cantonensis ACAC_0000798501 N 0.418
ACOC_0001190001 Angiostrongylus costaricensis ACOC_0001190001 N 0.418
cassava43469.valid.m1 Manihot esculenta cassava43469.valid.m1 I 0.417
Cucsa.302100 Cucumis sativus Cucsa.302100 I 0.417
cassava30083.valid.m1 Manihot esculenta cassava30083.valid.m1 I 0.417
cassava17722.valid.m1 Manihot esculenta cassava17722.valid.m1 I 0.417
mgf003166m Mimulus guttatus mgf003166m I 0.417
mgf011463m Mimulus guttatus mgf011463m I 0.417
Cucsa.320600 Cucumis sativus Cucsa.320600 I 0.417
Cagra.0537s0004 Capsella grandiflora Cagra.0537s0004 I 0.417
Bostr.10273s0455 Boechera stricta Bostr.10273s0455 I 0.417
mgf015806m Mimulus guttatus mgf015806m I 0.417
Ca_25981 Cicer arietinum Ca_25981 I 0.417
TRIUR3_29073 Triticum urartu TRIUR3_29073 I 0.417
VIT_02s0154g00070 Vitis vinifera VIT_02s0154g00070 I 0.417
TRIUR3_27479 Triticum urartu TRIUR3_27479 I 0.417
Traes_6DL_59DB06B9F Triticum aestivum Traes_6DL_59DB06B9F I 0.417
Traes_6AL_2983D4EB6 Triticum aestivum Traes_6AL_2983D4EB6 I 0.417
Traes_6BL_3F8DB6043 Triticum aestivum Traes_6BL_3F8DB6043 I 0.417
VIT_15s0048g00550 Vitis vinifera VIT_15s0048g00550 I 0.417
Carubv10021641m.g Capsella rubella Carubv10021641m.g I 0.417
28200.m000191 Ricinus communis 28200.m000191 I 0.417
30174.m008839 Ricinus communis 30174.m008839 I 0.417
Pm023555 Prunus mume Pm023555 I 0.417
Pm017846 Prunus mume Pm017846 I 0.417
Cla011745 Citrullus lanatus Cla011745 I 0.417
cassava13963.valid.m1 Manihot esculenta cassava13963.valid.m1 I 0.417
Lus10010361.g Linum usitatissimum Lus10010361.g I 0.417
Pavir.Gb00743 Panicum virgatum Pavir.Gb00743 I 0.417
Pavir.Ib03707 Panicum virgatum Pavir.Ib03707 I 0.417
Pavir.Ga00891 Panicum virgatum Pavir.Ga00891 I 0.417
Pavir.Ab02534 Panicum virgatum Pavir.Ab02534 I 0.417
orange1.1g028144m.g Citrus sinensis orange1.1g028144m.g I 0.417
Pavir.Aa01223 Panicum virgatum Pavir.Aa01223 I 0.417
SapurV1A.0033s0530 Salix purpurea SapurV1A.0033s0530 I 0.417
SapurV1A.0217s0100 Salix purpurea SapurV1A.0217s0100 I 0.417
Thhalv10019126m.g Eutrema salsugineum Thhalv10019126m.g I 0.417
LjSGA_107961.1 Lotus japonicus LjSGA_107961.1 I 0.417
SapurV1A.2672s0010 Salix purpurea SapurV1A.2672s0010 I 0.417
SapurV1A.1275s0050 Salix purpurea SapurV1A.1275s0050 I 0.417
SapurV1A.0634s0130 Salix purpurea SapurV1A.0634s0130 I 0.417
orange1.1g027215m.g Citrus sinensis orange1.1g027215m.g I 0.417
MDP0000298333 Malus domestica MDP0000298333 I 0.417
gene32251-v1.0-hybrid Fragaria vesca gene32251-v1.0-hybrid I 0.417
Gorai.001G174800 Gossypium raimondii Gorai.001G174800 I 0.417
evm.TU.supercontig_29.121 Carica papaya evm.TU.supercontig_29.121 I 0.417
evm.TU.supercontig_145.3 Carica papaya evm.TU.supercontig_145.3 I 0.417
Ciclev10022170m.g Citrus clementina Ciclev10022170m.g I 0.417
Eucgr.E01474 Eucalyptus grandis Eucgr.E01474 I 0.417
Gorai.008G236500 Gossypium raimondii Gorai.008G236500 I 0.417
Traes_2BL_8BEA9CE1B Triticum aestivum Traes_2BL_8BEA9CE1B I 0.417
MDP0000192940 Malus domestica MDP0000192940 I 0.417
MDP0000291729 Malus domestica MDP0000291729 I 0.417
MDP0000171878 Malus domestica MDP0000171878 I 0.417
MDP0000124879 Malus domestica MDP0000124879 I 0.417
Lus10036496.g Linum usitatissimum Lus10036496.g I 0.417
Ciclev10021834m.g Citrus clementina Ciclev10021834m.g I 0.417
TCM_005549 Theobroma cacao TCM_005549 I 0.417
LPERR04G16190 Leersia perrieri LPERR04G16190 I 0.417
LPERR10G11580 Leersia perrieri LPERR10G11580 I 0.417
MLOC_60897 Hordeum vulgare MLOC_60897 I 0.417
LPERR02G20990 Leersia perrieri LPERR02G20990 I 0.417
GSMUA_Achr8G11580_001 Musa acuminata GSMUA_Achr8G11580_001 I 0.417
GSMUA_Achr11G03800_001 Musa acuminata GSMUA_Achr11G03800_001 I 0.417
GSMUA_Achr11G17520_001 Musa acuminata GSMUA_Achr11G17520_001 I 0.417
GSMUA_Achr7G07130_001 Musa acuminata GSMUA_Achr7G07130_001 I 0.417
MLOC_70653 Hordeum vulgare MLOC_70653 I 0.417
MTR_4g025900 Medicago truncatula MTR_4g025900 I 0.417
OBART04G20010 Oryza barthii OBART04G20010 I 0.417
OBART10G15260 Oryza barthii OBART10G15260 I 0.417
OGLUM02G26190 Oryza glumaepatula OGLUM02G26190 I 0.417
OBART02G25670 Oryza barthii OBART02G25670 I 0.417
OB04G27010 Oryza brachyantha OB04G27010 I 0.417
MTR_4g101660 Medicago truncatula MTR_4g101660 I 0.417
OB02G33040 Oryza brachyantha OB02G33040 I 0.417
GRMZM2G529859 Zea mays GRMZM2G529859 I 0.417
GRMZM2G167824 Zea mays GRMZM2G167824 I 0.417
BRADI3G50050 Brachypodium distachyon BRADI3G50050 I 0.417
BRADI5G16910 Brachypodium distachyon BRADI5G16910 I 0.417
F775_25525 Aegilops tauschii F775_25525 I 0.417
BRADI3G30410 Brachypodium distachyon BRADI3G30410 I 0.417
Bra004364 Brassica rapa Bra004364 I 0.417
BGIOSGA014650 Oryza indica BGIOSGA014650 I 0.417
Bo6g108630 Brassica oleracea Bo6g108630 I 0.417
F775_27799 Aegilops tauschii F775_27799 I 0.417
CRC Arabidopsis lyrata fgenesh2_kg.2__1172__AT1G69180.1 I 0.417
GRMZM2G005353 Zea mays GRMZM2G005353 I 0.417
GRMZM2G054795 Zea mays GRMZM2G054795 I 0.417
GRMZM2G074543 Zea mays GRMZM2G074543 I 0.417
GLYMA17G14710 Glycine max GLYMA17G14710 I 0.417
GLYMA05G04260 Glycine max GLYMA05G04260 I 0.417
GLYMA01G33370 Glycine max GLYMA01G33370 I 0.417
GLYMA03G03500 Glycine max GLYMA03G03500 I 0.417
Traes_2AL_71DE02042 Triticum aestivum Traes_2AL_71DE02042 I 0.417
OGLUM04G19890 Oryza glumaepatula OGLUM04G19890 I 0.417
PRUPE_ppa010905mg Prunus persica PRUPE_ppa010905mg I 0.417
PRUPE_ppa011209mg Prunus persica PRUPE_ppa011209mg I 0.417
Sb01g017560 Sorghum bicolor Sb01g017560 I 0.417
POPTR_0014s06210 Populus trichocarpa POPTR_0014s06210 I 0.417
POPTR_0003s11230 Populus trichocarpa POPTR_0003s11230 I 0.417
POPTR_0001s00240 Populus trichocarpa POPTR_0001s00240 I 0.417
POPTR_0002s14600 Populus trichocarpa POPTR_0002s14600 I 0.417
Sb04g033590 Sorghum bicolor Sb04g033590 I 0.417
Sb06g023770 Sorghum bicolor Sb06g023770 I 0.417
CRC Arabidopsis thaliana AT1G69180 D 0.417
TCM_016030 Theobroma cacao TCM_016030 I 0.417
Traes_1DL_C5AF9D06A Triticum aestivum Traes_1DL_C5AF9D06A I 0.417
Solyc01g091010.2 Solanum lycopersicum Solyc01g091010.2 I 0.417
Si036788m.g Setaria italica Si036788m.g I 0.417
Si010859m.g Setaria italica Si010859m.g I 0.417
Si018146m.g Setaria italica Si018146m.g I 0.417
PGSC0003DMG400025969 Solanum tuberosum PGSC0003DMG400025969 I 0.417
YAB3 Oryza sativa OS10G0508300 I 0.417
ONIVA04G18220 Oryza nivara ONIVA04G18220 I 0.417
ONIVA04G21490 Oryza nivara ONIVA04G21490 I 0.417
OPUNC02G23520 Oryza punctata OPUNC02G23520 I 0.417
ONIVA02G28110 Oryza nivara ONIVA02G28110 I 0.417
OMERI10G11950 Oryza meridionalis OMERI10G11950 I 0.417
OLONG_018621 Oryza longistaminata OLONG_018621 I 0.417
OMERI02G25190 Oryza meridionalis OMERI02G25190 I 0.417
OMERI04G17000 Oryza meridionalis OMERI04G17000 I 0.417
OPUNC10G13730 Oryza punctata OPUNC10G13730 I 0.417
ORGLA02G0220100 Oryza glaberrima ORGLA02G0220100 I 0.417
ORUFI10G16240 Oryza rufipogon ORUFI10G16240 I 0.417
YAB4 Oryza sativa OS02G0643200 I 0.417
YAB5 Oryza sativa OS04G0536300 I 0.417
ORUFI04G21570 Oryza rufipogon ORUFI04G21570 I 0.417
ORUFI02G27080 Oryza rufipogon ORUFI02G27080 I 0.417
OGLUM10G15140 Oryza glumaepatula OGLUM10G15140 I 0.417
ORGLA04G0171000 Oryza glaberrima ORGLA04G0171000 I 0.417
PK25712.1 Cannabis sativa PK25712.1 N 0.415