scaffold593-EXSNAP2012.5 (Pristionchus exspectatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 scaffold593-EXSNAP2012.5 T336910_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold593-EXSNAP2012.5 Sox 43 87

Links

Other Sox family TFs
Other Pristionchus exspectatus TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PPA12247 Pristionchus pacificus PPA12247 N 0.693
OESDEN_18796 Oesophagostomum dentatum OESDEN_18796 N 0.571
ANCCAN_19939 Ancylostoma caninum ANCCAN_19939 N 0.522
ANCDUO_24269 Ancylostoma duodenale ANCDUO_24269 N 0.516
Sakowv30021656m.g Saccoglossus kowalevskii Sakowv30021656m.g N 0.505
HPBE_0001796801 Heligmosomoides bakeri HPBE_0001796801 N 0.505
WBGene00237022 Onchocerca volvulus WBGene00237022 N 0.492
BTMF_0000229601 Brugia timori BTMF_0000229601 N 0.492
ACOC_0001190001 Angiostrongylus costaricensis ACOC_0001190001 N 0.491
ACAC_0000798501 Angiostrongylus cantonensis ACAC_0000798501 N 0.491
NECAME_14932 Necator americanus NECAME_14932 N 0.486
OFLC_0000496201 Onchocerca flexuosa OFLC_0000496201 N 0.482
SMUV_0000634201 Syphacia muris SMUV_0000634201 N 0.475
ENSCING00000000505 Ciona intestinalis ENSCING00000000505 I 0.470
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.459
TCLT_0000071201 Thelazia callipaeda TCLT_0000071201 N 0.457
GPUH_0002275001 Gongylonema pulchrum GPUH_0002275001 N 0.457
WUBG_06999 Wuchereria bancrofti WUBG_06999 N 0.457
SVUK_0001721701 Strongylus vulgaris SVUK_0001721701 N 0.457
LOAG_08062 Loa loa LOAG_08062 N 0.457
EEL_0000629001 Elaeophora elaphi EEL_0000629001 N 0.455
nAv.1.0.1.g09805 Acanthocheilonema viteae nAv.1.0.1.g09805 N 0.455
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.454
fgenesh2_pg.scaffold_4000274 Monosiga brevicollis fgenesh2_pg.scaffold_4000274 N 0.444
ASIS014204 Anopheles sinensis ASIS014204 N 0.442
HPBE_0002310801 Heligmosomoides bakeri HPBE_0002310801 N 0.441
DME_0000590001 Dracunculus medinensis DME_0000590001 N 0.439
GPUH_0000029001 Gongylonema pulchrum GPUH_0000029001 N 0.437
TCNE_0000520101 Toxocara canis TCNE_0000520101 N 0.433
AEPI010254 Anopheles epiroticus AEPI010254 N 0.433
ALUE_0001190701 Ascaris lumbricoides ALUE_0001190701 N 0.433
CpipJ_CPIJ003178 Culex pipiens CpipJ_CPIJ003178 N 0.433
CPIJ003178 Culex quinquefasciatus CPIJ003178 N 0.433
BTMF_0000420901 Brugia timori BTMF_0000420901 N 0.431
scaffold_600397.1 Arabidopsis lyrata scaffold_600397.1 I 0.431
NEMVEDRAFT_v1g59568 Nematostella vectensis NEMVEDRAFT_v1g59568 N 0.430
L798_00437 Zootermopsis nevadensis L798_00437 N 0.427
AMAM014030 Anopheles maculatus AMAM014030 N 0.427
PHUM393920 Pediculus humanus PHUM393920 N 0.427
AMIN005634 Anopheles minimus AMIN005634 N 0.427
estExt_fgenesh3_kg.C_170031 Heterobasidion annosum estExt_fgenesh3_kg.C_170031 I 0.424
HETIRDRAFT_439796 Heterobasidion irregulare HETIRDRAFT_439796 I 0.424
CBN04053 Caenorhabditis brenneri CBN04053 N 0.423
SVUK_0001398701 Strongylus vulgaris SVUK_0001398701 N 0.421
ANCDUO_11855 Ancylostoma duodenale ANCDUO_11855 N 0.421
ANCCEY_10464 Ancylostoma ceylanicum ANCCEY_10464 N 0.421
ANCCAN_21637 Ancylostoma caninum ANCCAN_21637 N 0.421
NECAME_10840 Necator americanus NECAME_10840 N 0.421
DICVIV_01337 Dictyocaulus viviparus DICVIV_01337 N 0.421
Ocbimv22010533m.g Octopus bimaculoides Ocbimv22010533m.g N 0.419
TELCIR_05217 Teladorsagia circumcincta TELCIR_05217 N 0.415
TELCIR_22690 Teladorsagia circumcincta TELCIR_22690 N 0.415
NBR_0001132501 Nippostrongylus brasiliensis NBR_0001132501 N 0.415
HPLM_0000803901 Haemonchus placei HPLM_0000803901 N 0.415
HCOI00417600 Haemonchus contortus HCOI00417600 N 0.415