CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TsM_000545400
(
Taenia solium
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
TsM_000545400
T337232_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TsM_000545400
Sox
164
219
RRLKAAYLAYEEKMLPQLRKEHPGMRHSQLTQMIFKSFQTAPENPKNQAHKQYNEK
Links
Other
Sox
family TFs
Other
Taenia solium
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EmuJ_000938500
Echinococcus multilocularis
EmuJ_000938500
N
0.709
EmuJ_000916900
Echinococcus multilocularis
EmuJ_000916900
N
0.709
TASK_0000467701
Taenia asiatica
TASK_0000467701
N
0.666
ECPE_0001800901
Echinostoma caproni
ECPE_0001800901
N
0.562
DILT_0001250601
Diphyllobothrium latum
DILT_0001250601
N
0.550
T265_00523
Opisthorchis viverrini
T265_00523
N
0.543
HNAJ_0000101901
Hymenolepis nana
HNAJ_0000101901
N
0.529
A_06553
Schistosoma haematobium
A_06553
N
0.520
Smp_004360
Schistosoma mansoni
Smp_004360
N
0.520
SMRZ_0002114501
Schistosoma margrebowiei
SMRZ_0002114501
N
0.514
TRE_0001918901
Trichobilharzia regenti
TRE_0001918901
N
0.513
SMU15012775
Schmidtea mediterranea
SMU15012775
N
0.508
Sjc_0011880
Schistosoma japonicum
Sjc_0011880
N
0.507
HDID_0000279401
Hymenolepis diminuta
HDID_0000279401
N
0.504
TMUE_s0148001000
Trichuris muris
TMUE_s0148001000
N
0.442
CLEC002888
Cimex lectularius
CLEC002888
N
0.436
ANCCAN_29654
Ancylostoma caninum
ANCCAN_29654
N
0.420
ANCCEY_08672
Ancylostoma ceylanicum
ANCCEY_08672
N
0.420
NBR_0000605501
Nippostrongylus brasiliensis
NBR_0000605501
N
0.417